Ralstonia solanacearum CMR15: CMR15_10401
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Entry
CMR15_10401 CDS
T02725
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit; RNA polymerase alpha chain family
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMR15_10401 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsm03021
]
CMR15_10401 (rpoA)
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_10401 (rpoA)
Enzymes [BR:
rsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMR15_10401 (rpoA)
Transcription machinery [BR:
rsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMR15_10401 (rpoA)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMR15_10401 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CBJ36610
LinkDB
All DBs
Position
428640..429620
Genome browser
AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIASLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
AARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctgaagcccaaaattattgcggttgagccgcttggcgatcatcac
gcgaaggtcgtcatggaaccgttcgagcggggctacggccatacgctcggcaacgcgttg
cgccgcgtgctgctgtcgtcgatggttggctatgcgccgaccgaagtgacgatcgctggg
gtcgtccacgaatattccaccatcgacggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcacaaccgtgacgaagtcacggtgtcgctgcgc
aaggaaggcgaaggtgtggtcaccgcggcggatatcgagctgccgcacgatgtcgagatc
atcaatccgggccatgtcatcgccagcctgtcggccggtggcaagctggatatgcagatc
aaggtcgagcaaggccgcggctacgtgccgggcaacgtgcgcaagttcggcgacgagtcg
agcaaggtgatcggccgcatcgtgctggacgcctcgttcgcaccggtgcgccgcgtgtcg
tatgccgtcgagtccgcgcgcgttgagcagcgtaccgacctcgacaagctggtgatgaac
atcgagaccaacggcgtgatctcgcccgaggaagcgatccgccagtcggcgcgcatcctg
gtcgaccagctgtcggtgttcgcggcgctggaaggcaccgagagcgccgccgaagccgct
gccgcccgcgcaccgcagatcgatccgatcctgctgcgcccggtcgacgacctggagctg
accgtccgctcggcgaactgcctgaaggccgaaaatatttactatattggcgacctgatc
cagcgcaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgaa
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggcctggagaagtaa
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