Ralstonia solanacearum CMR15: CMR15_10638
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Entry
CMR15_10638 CDS
T02725
Name
(GenBank) putative Exoribonuclease II (rnb)
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsm03016
]
CMR15_10638
Enzymes [BR:
rsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CMR15_10638
Transfer RNA biogenesis [BR:
rsm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CMR15_10638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CBJ36846
LinkDB
All DBs
Position
679028..681109
Genome browser
AA seq
693 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELAQAAQAL
SAEIDLDFLWECAPAEEFGFTDLAGEYFGTDADATRQAALAIALHGSPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAAQQAAYEAELKAMRLPDTFHGKALQLLFKPDKNSIEFKA
FDAACTALGMSPMRLMVAVGGIANARALHEARFLSECFPKGIGFPDVTVPEPALDLPAAD
VRAFSIDDVTTTEIDDAISVTPLDAATVRIGIHIAAPGFGIQRGEALDAIARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPALSLYVTVDRATWAVSASETRCEIVTVAANLRHNL
LDEIVTAEALAAGTGDYPFKDELAVLWPFVGALYDARQQARIASGLKPEGAQKGDYSFYL
DPIPEAEGGGERVRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVMAKLIAPFKPKDA
DLLAAVADFEATYAAYAAHQSTMERYWCLRWLKQEVRTRTQAVVLKEGMVRFAEIPLMTR
VPELAQTARGTHVVLDVLEIDEIGLEVSCRVVEVLAPAADAEVEAAALEDELAQAEAEVP
AEPQPAADGEEIRAETGDVVAPPQQDDGTSAAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgtttgaagaaggcggcgagatccgcgcaggcaccgtcttgtcccagcag
ggcgaggcctatcaggtcgaattgccgagcgccaagcgcaccaaggtcaagtcgcgtgac
gtgctgctgcagttcgcccagccgtcggccggtgaactggcgcaggccgcgcaggcgctg
tcggcggagatcgacctggatttcctgtgggaatgcgcgcccgccgaggagttcggcttc
accgatctggccggcgagtacttcggcaccgacgccgatgccacgcgacaggccgcgctt
gcgatcgcgctgcacggctcgcccatctatttccgccgcaagggccggggccgctaccag
cgggcgcccgaagaccagctcaaggcggcgctcgccgggctggagcgcaagaagcagcag
gccgcgcagcaggccgcctatgaagccgagctgaaggccatgcgcctgcccgacactttc
cacggcaaggcgctgcagctgctgttcaagcccgacaagaacagcatcgaattcaaggcg
ttcgatgccgcatgcacggcgctcgggatgtcgccgatgcggctgatggtggcggtcggc
ggtatcgccaatgcgcgtgcgctgcacgaggcacgcttcctgtcggagtgtttcccgaag
ggcatcggttttcccgatgtgacggtgccggagccggcgctcgacctgccggccgccgac
gtgcgcgccttctccatcgacgacgtgaccaccacggaaatcgacgatgcgatttcggtc
acgccgcttgatgcggccacggtgcgcatcggcatccacatcgcagcgcccggtttcggc
atccagcgcggcgaagcgctcgacgcgatcgcgcgccagcggctgtccaccgtgtatttc
cccggcgacaagatcaccatgctgccggagtcggtggtggatcgctacacgctgcaggaa
gggcgcgcgtgcccggcgctgtcgctgtatgtgacggtcgatcgcgccacctgggcggtg
agcgccagcgagacgcgctgcgagatcgtgacggtggcggccaacctgcgccacaacctg
ctggacgagatcgtcaccgccgaggcgctggccgccggcaccggcgattacccgttcaag
gacgaacttgccgtcctgtggcctttcgtgggcgcgctgtacgatgcccgccagcaggca
cgcatcgccagcggcctgaagccggaaggcgcgcagaagggcgactacagcttctacctg
gacccaatccccgaagccgagggcggcggcgagcgcgtccgcatcgagcagcgcaagcgc
ggctcgccgctggacaagatcgtcgccgagttgatgattcttgccaacagcacctggggc
cgcatgctggccgatgccggcgtgccgggcatctaccgcacgcagaaggcgtggggcatg
caccgcacgcgcatgcagacctacccggcgccgcacgaggggctgggcgtggcgcaatac
gcgtggagcacctcgccgctgcgccgctacgtcgatctggtcaaccagtggcagatcgcg
gcggtggcgcagcacggtgtgatggccaagctgatcgcgcccttcaagccgaaggatgcc
gacctgcttgccgccgtggccgacttcgaagccacgtatgccgcctatgccgcgcaccag
tcgaccatggagcgctactggtgcctgcgctggctcaagcaggaagtgcgcacccgcacg
caggccgtggtgctgaaggaaggcatggtgcgcttcgccgagatcccgctgatgacccgg
gtgccggaactggcgcagaccgcgcgcggcacgcacgtcgtgctcgacgtgctggagatc
gacgagatcggcctggaagtgtcgtgccgcgtggtcgaggtgcttgccccggcagcggat
gccgaggtggaggccgccgcgctggaggacgagctggcgcaagccgaagcggaggtgccg
gccgaaccacagccggccgccgatggagaagaaatccgcgccgagaccggcgatgttgtg
gcgccgccgcagcaggacgatggaacgtctgccgctagctaa
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