Ralstonia solanacearum CMR15: CMR15_10714
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Entry
CMR15_10714 CDS
T02725
Name
(GenBank) putative metalloprotease, Hemolysin-type calcium-binding region (rtxA)
Organism
rsm
Ralstonia solanacearum CMR15
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
Motif
Other DBs
NCBI-ProteinID:
CBJ36922
LinkDB
All DBs
Position
759629..766915
Genome browser
AA seq
2428 aa
AA seq
DB search
MLTITNGALGAGQIVINGFNLNRAQTDPNGYLGIKFKKKIAVAVGANRSDDPFLDGTYSP
SDIVTAAKGVLQTLTVYASASSTIAQQVTLALVGDPSQFRIVTGADLLDFAVGAVTLTIP
PGVDSVTVGLVYTGNDPSATAQLTATLADPNASAGDVATTSNTFTVNFAADSDQTSSSSQ
NQPDNVINGDLNPINFGTDDNPQYQRDALGNLITDPTSSAPGRDDTLYGSSGNDLINAGG
GNNQVWGGEGADTIIAGDGGNLIHDGDGNNSITVGNGANQIFLGNGANTLITGTGSDYVT
VGDGNNQIEGNGGRDVIVAGNGDNAIFANKKIDLASAIANRDSLSAAGLQGDLIAVGSGN
NTIVSGTGNDLVVLGGGNDVVVLGPGNDTVVGGEVASQVYPAWSAPSVMTDAATGGQPSA
GHFVDAVTHYQGLTTTSSGGYVPSADLSALLAQYPSTQQYNVDAYGNPDGGGSETIFGGS
GNDLIITSNGNNYIDAGSGNSLVCAGAGDDTIFAGTGNSTITGGGGDDYIDGESGNHLMA
GGAGNNTIFGGSGNDTIYAGVAYGSSTGDINAGNNYVDAGSGNSIVFGSAGNDTLMAGSG
QDTLVAGNGNTTIYGGTGVDLIYGGSGNDLIYAGDGGTAGVVTTVVAGSGNTTIYGGLGV
DVIYGGAGSDVIYVGDGGSAAQRSVVYAGSGNTTVYGGLGADEIHGGSGNDVLYAGDGGS
TDAPTVVYAGTGNSTLYGGAGVDILNASAAGSTLLVGGSGNETLLGGAGDDTLVAGTGND
SMDGGAGSNTYIFNSGAGSTEIVQSGGTDILQFGSGISASDLSISATLGANGAPALEISV
GGSSVIVDGAFSGQVGAVTFADGGTMSLAQLMAQAEIVSSTITSTADSSVVFDASGNIRV
TKYADDGTALSDSWQSVDGSHGIDTFQPNGSSRGQSWYANNRTGVSFGDGAGNNTTYIYN
ALGNLVADNWTKSDSSSGTDTINSDGSSAGKATSADGSTSTYTTDSQGNKTTKNYSSEGV
LTDDAWTHSDGSSGSDVFDANGNVTQATTVAADGSKSVQTNDGQGNTSTTQFDVSGNKTG
DTWQAADGSHGSDQLSNGAWTSLQYASDGSYTRSTKDTLGDTTAQQFNASGVMTGSSWSN
ADGTHGSTTIAADGSSTGISYNRDGSYTQTTTSATGNTVTGYYASTGQLLYDAWHNTDGT
SGHDNFTGVASDVTANFQRAGVYALASSTPDGTIEIDTYNGQHSKVFSISSGTSSEPSYG
GGYGGGYGGGYGGSYGSLVSGSDLTQVTYGEGGSRAYQETTFDQGAGSMRSVDVLADGSD
LARLWDAGSLNGQSIVSSTTSYDVQGAEFTGTPASSLAYDVITPWGGGVKIQNSNGLVYY
YDGGSGVQNLGGWAGAGPVVAVSGLDAAINFANGNETTDVTYSDGGYDHYTTYHGWIVSD
EWSDGHGSHGTLTTTYPAGQSPIGSQAVITRTTTNAAGYTTVTVGSGRTDVTTRYYPDGT
VAEVSRSEPSTMGLQADTLRDSAGNVFSSTYTDPTSADATPTVQTVSTDAAGDTITTRYT
YRAVDYSYVPNTATSTWTTQDGTHVSATFDLSSGVGTETINYTDGTYSVVANDASGGYMA
RNYDASGTLVSDVWQDGQGSNGIDTIQASGIVDSTATYYLAQGVTETVSTTTQADGSYVR
TWTKTDGSTGTDTHHADGTGSGTVQYANGTYSTYTSTAQGVVTTLDYDASGNQVDYAVAA
TDSAGNWLQTTYDLNGVRLSDRWTHADGTTGTDVFNADGSVETKTSFTDASGVTTTTDTV
TQPDGSFQRTWSKSDGSSGTDIRNADGSMSGVSDSPTGGHGTYTDDGHGDVSHTVTATAD
SQTLVGASVGVNLLQADAAYSNVTLQGGPGSDTFVLNAVAGSRDVAELGDGSNVVYGQDG
NDEVDLGAGDNIINLGNGSNYIGSTRSSNAGNGNNAIYLGDGQNTVWLGDGDNVLGVGTG
LDQIHVGNGNNTLYAGHGSSNDTIQGGDGDNTVTVGDGANTVTVGNGKNKIWGGNGNNQV
NVGDGNDTIGLGSGNNIVKTGNGASSVSVGDGMNQIGLGDGANTVSAGAGTNVIRGGNGD
NAAYVGNGDNDVEFGGGNNTVGLGTGNNTVLLGGGANTVYAGYGTGSNSISVGNGANTVT
VADGANYINAGNGTDHVYGGNGDNTIWLGNGVDTVNLGDGANSIHIWDGDSAVYVGNGSN
QIRLGLGNDVVSAGNGNNTLTTGDGNSNIWMGAGNNQIQVGNGNNTIGIGGVAGSTNTIQ
AGDGNNTIAVAAGTNDIRVGNGTDRLQTGNGVNTIHLGSGQVTLTNYGGQDTVTFASSVQ
DDQLWFAQDGNDLLVTVDGTSSNLRLTDWFNGATHATLVAGDGHQLIDSQVASLVQAMSQ
FSPPAVGQTTLSQAQQDSLTPVIAASWR
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
gtgctaacgattacgaacggagcgctcggggccggtcagattgtgattaacggcttcaat
ctgaatcgcgctcagacagacccgaacggatacctcggaattaagttcaagaaaaaaatt
gccgtagccgttggtgccaatcgcagcgatgatccctttctcgatgggacgtactccccg
tctgatattgtcacagcggcaaagggcgtgcttcagacgctgacagtctacgcttcggcg
agcagcaccattgcacagcaggtcaccttggcgctggtgggagatccgtcgcagtttagg
atcgttacaggtgcggatttgctcgattttgcggttggggctgtcacgctaacaattccg
cctggcgttgacagtgtcaccgttggcctcgtgtacaccggcaatgacccgagcgcgacc
gcgcaattgactgcgacgcttgctgatccgaacgcatcggccggagacgtggccacgacc
agcaatacctttactgttaactttgctgccgattccgaccagacttcctcgtcctctcag
aatcaaccagacaacgtcatcaacggcgacctcaacccaatcaatttcggcacagacgac
aacccgcaatatcaacgcgacgcactcggcaacctgatcaccgacccgacctcatcggct
ccaggcagggatgacactctgtatgggagttcaggaaatgatctgattaatgccgggggc
ggaaataaccaagtatggggtggtgagggggctgacaccatcatagctggcgatggtggc
aatctgattcatgatggtgatgggaataacagcatcaccgtgggaaatggtgccaaccag
attttcctggggaatggcgcaaacaccctaatcacggggacgggctcggactatgtgact
gtcggggacggtaacaaccagattgaaggtaacggcggacgcgatgtcatcgtcgcgggt
aatggtgacaatgccatcttcgccaacaaaaagatcgatttggcatcggcgatcgcaaac
cgtgacagccttagcgcagccggtctgcaaggtgatctcattgcggtcggcagcggaaac
aatacgatcgtatcgggcaccggcaacgatttggttgtcctgggcgggggtaacgacgtt
gtcgttttgggacctggcaacgatacggtggttggtggtgaggtggctagccaagtctat
ccggcttggagtgccccgtcagtgatgaccgatgcagcgacgggaggccaaccgtctgca
gggcattttgtcgatgcggtaacgcactatcagggactgacgacgacaagtagtggaggg
tatgttccgtcagctgacctctcagctttgttggcgcaatatcccagcactcagcaatac
aacgtggatgcctatggaaatccggatggcggtggtagcgagaccatttttggcggatcc
ggcaatgacctgatcattacgtcaaatgggaataactacatcgatgccgggtccggtaat
agtttggtgtgcgcaggagccggggatgacacgatttttgcaggaacgggcaatagcacc
attactggcggtggtggggatgattacatcgatggggaatcgggtaaccatctgatggcc
ggtggtgctggaaataacacgatctttggtggtagcggaaacgatacgatttatgctggt
gtggcttatgggtcgtccactggggatatcaacgccggtaacaactacgtcgacgccggc
agcggcaacagcattgtcttcgggtcggcaggaaacgacacactgatggccggcagcggc
caggacacgcttgtcgcaggcaacggcaacacaaccatctatggcgggaccggtgtcgac
ctgatttatggcggcagcggcaacgatttgatctacgcgggtgacggcgggacggctggc
gtggtaaccaccgtggttgccggcagcggcaacaccaccatctacggtgggctgggcgtt
gacgtcatttacggtggcgctgggtccgacgtgatctacgtcggcgatggcgggagcgcc
gctcaacgctccgtcgtctacgcgggttccggtaacaccacggtctatggcggcctcggt
gccgatgaaatccacggtggaagcggcaatgacgtgttgtacgccggcgatggcggcagc
acggatgcacccaccgttgtctatgccggcacggggaacagcaccctttacggcggtgcg
ggcgtcgacattctgaatgcctcggctgcaggcagcaccttgctggtgggcggcagcggc
aatgagaccctgctgggcggcgccggtgacgacaccctggtcgcaggtactggcaacgac
tcgatggatggcggtgccggcagcaatacctacatattcaacagcggagccggctctacc
gagatcgtgcagagcggcggcaccgacatccttcaattcgggtcgggcatttccgcgagc
gacctcagcatttccgccacgctgggcgcgaatggcgcaccggcgctggaaatttccgtt
ggcggcagttcggtgatcgtcgacggggcgtttagcgggcaggtgggggccgtgaccttc
gccgacggcggcacgatgagtctggcgcagttgatggcgcaggcagagattgtgtcgagc
accatcacgagtaccgctgactccagcgtagtgttcgatgcatcgggcaacattcgcgtc
acgaagtatgcggacgacggtaccgcgctcagcgactcttggcagagtgtggacggttca
catggcattgacacattccagccaaacggctcaagccgaggtcagtcttggtatgccaac
aatcgaactggtgtcagcttcggcgatggagccggcaacaatacgacctacatctacaac
gccctgggcaacctcgtcgcagacaactggaccaagagtgacagttcgtctggcacagac
accatcaacagcgacggctccagcgcgggcaaggcgacaagcgcagacggttcgacgagc
acttacaccacggattcccaaggcaacaagacgacgaagaactattcgtcagagggtgtt
ctgacggatgacgcttggacgcattccgacggtagctccggcagcgacgtgttcgacgcc
aacggcaacgtcacccaggccacgacagttgccgccgatggctcgaagtccgtccagaca
aatgacggtcagggcaacacgtccacgacccagtttgatgtgagcggcaacaaaactggc
gacacatggcaagccgccgatggttcgcatggcagcgatcaactgagcaacggggcttgg
acgagtctgcaatacgcgtcggatggcagctatacgcgctcgaccaaagacacgcttggc
gataccacagcgcagcagttcaatgccagcggcgtcatgaccggcagttcctggtcgaac
gccgacggcacgcatggctccacgacgattgctgccgatggctccagcacggggatcagc
tataaccgtgatggcagctatacacagacgaccacgagcgcgaccggcaacacggtgacc
ggctactacgcgtccaccggccagttgctctacgacgcttggcacaacaccgatggcact
tcaggccatgacaacttcactggcgtggcatccgatgtgacagccaatttccagcgggcc
ggcgtatacgccctggcatcgtcgacgcccgacggcaccattgagattgacacctacaac
ggccagcacagcaaggtcttttcgatcagtagtggcacgtccagtgagccaagctatggc
ggcggctacggtggtggttatggcggcggctatggtggcagctacggcagcctggtttcc
ggtagcgacctgactcaggtgacttacggagaggggggcagccgggcgtatcaggaaacg
acgtttgatcaaggtgccggctccatgcggagtgtggacgtattggcggacggcagcgat
ctggcacgcctttgggatgcagggtcgcttaacggccagagcattgtgtcgagcaccacg
agttacgacgtgcaaggggctgaattcaccgggacgcctgcgtcgtctctggcctacgac
gtgatcaccccttggggcggcggcgtcaagattcagaacagcaacggtctcgtgtactac
tacgatggcggcagcggcgtgcagaacctgggcggttgggcaggggcgggcccggttgtg
gctgtgagcgggttggatgccgccatcaacttcgcgaacggtaatgaaacaacggacgtt
acgtatagcgatggcggctacgatcactacacgacctaccacggctggattgtctctgac
gagtggtcagacggccatggctcacatggaaccttgacgacaacgtatcccgccggtcag
tcccccattggatcgcaagccgtcattacgcggacgacaaccaatgctgccggctacacc
accgttacggtgggatcgggcagaaccgacgtaacgacccgctattacccggatgggacc
gtagccgaggtgtcgcgctcagagccctccacgatgggcttgcaggccgatacgctgcgc
gactcggcaggtaacgtgttctcgtccacgtataccgacccaacaagcgcggatgccacg
cctacggttcagactgtttccaccgacgccgcaggcgatacgatcaccacgcgctatacg
tatcgcgcagtggactacagctatgtccccaacaccgccacgtcgacgtggacgacgcag
gacggcacgcatgtgtccgcaacgttcgatttgtcgtcgggcgtcggtacggagacgatc
aactatacggacggtacttacagcgtggtggcgaacgacgccagcggcggctacatggca
cgcaactacgacgccagcggtacgctcgtcagtgatgtttggcaggacgggcaaggtagc
aacggtatcgataccatccaagcttccggtatcgtcgattccactgccacctattatttg
gctcaaggcgtcacggaaacggtttccacgaccacgcaggcagacggctcgtacgttcgc
acgtggaccaaaaccgacggctcgaccggcaccgacacccatcacgcggatggcacgggc
tcggggacagttcaatacgccaacggaacctacagcacctacacgagtaccgcccaaggg
gtggtaacaaccctggattacgacgcgagcggcaaccaggtcgattacgccgtcgccgcc
acggacagcgccgggaactggttgcaaaccacctacgacctcaatggcgtcaggttgagt
gaccggtggacgcatgccgacggcacaacgggtaccgatgtgttcaacgccgatggttcg
gtcgaaaccaagacatcgttcacggatgcctcgggtgttaccacgaccacggacaccgtc
acgcagcccgatggatcgttccagcgcacctggagcaagtccgacggctcgagcggaacc
gatatccgcaatgccgatggttcgatgagcggcgtcagcgactcgccaaccggcggtcac
ggcacttacacagacgatggccacggcgatgtttcgcacacggtgacggcaacggccgac
agtcagaccctggttggggcaagcgttggcgtgaaccttctgcaagccgatgcggcgtac
agcaacgtcaccctgcaaggcggtccgggcagcgacacctttgtcctgaatgccgttgcc
ggttcgcgggacgttgccgagcttggtgacggtagcaacgtggtgtacggccaggacggc
aacgacgaggtcgatctgggcgccggcgacaacatcatcaatctcgggaacggcagcaac
tatatcggttcgacccggagctccaacgctgggaacggcaacaacgcaatctacctcggc
gatggtcaaaacacggtgtggctgggtgacggtgacaacgtcctcggcgtgggcaccggc
ctcgaccagatccatgtcggcaatggcaacaacacgctgtacgccggccatggctcctcg
aatgacacgatccagggtggcgacggcgacaacaccgtgaccgtgggtgacggcgccaac
accgtcaccgttggcaatggcaagaacaagatctgggggggcaacggcaacaaccaggtc
aacgttggcgacggcaatgacacgatcgggttgggaagcggcaacaacatcgtcaaaacc
ggcaatggcgcaagcagtgtttccgttggcgatgggatgaaccaaatcgggttgggtgat
ggtgccaacaccgttagtgcgggcgcaggcaccaacgtcatccgtggaggcaatggcgac
aacgccgcctacgtgggcaatggtgacaacgacgtcgagttcggtggcggcaacaacact
gtaggactgggcaccggcaacaacaccgtcctcctgggtggtggcgccaataccgtctac
gcaggttacggaaccggtagcaatagcatctccgtcggaaatggcgcaaacacggtgacg
gtggcggatggcgccaactacatcaacgctggcaatggcactgaccacgtgtacggtggc
aatggcgacaacaccatctggctcggcaacggtgtcgacacggtcaatctgggtgatggc
gccaacagcatccatatctgggatggtgacagcgccgtgtatgtcggtaacggcagcaac
cagatcagactgggccttggtaacgatgtggtgagtgctgggaacggtaacaacaccctg
acgactggtgacggcaatagcaacatctggatgggggccggtaacaaccagatccaggtt
ggcaacggcaacaacaccatcggtatcggcggtgttgccggcagcaccaatacgatccag
gcgggcgatggcaacaacaccatcgcagtggccgcaggcaccaacgacatccgggtaggc
aacgggacggataggctgcaaaccggcaacggtgtcaacacgatccatctcggctctggc
caggtcacactcaccaactacggcggccaggacacagtcaccttcgcctcctcggtgcag
gacgaccagctctggttcgcgcaggacggcaacgacctgctggtgacggtcgacggaacc
tcgtcgaacctgcgcttgaccgactggttcaacggtgcgacgcatgccaccctggttgcc
ggcgatggccatcagctgatcgacagccaggtggcatcgctggtccaggcgatgtcgcag
ttctcgccgccggccgtgggccagacgacgctatcgcaggcgcagcaggacagcctgacg
ccggtgattgcggcgagctggcgttaa
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