Ralstonia solanacearum CMR15: CMR15_10784
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Entry
CMR15_10784 CDS
T02725
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMR15_10784 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsm03019
]
CMR15_10784 (pcnB)
Enzymes [BR:
rsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CMR15_10784 (pcnB)
Messenger RNA biogenesis [BR:
rsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CMR15_10784 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
CBJ36991
LinkDB
All DBs
Position
complement(839339..840886)
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AA seq
515 aa
AA seq
DB search
MIKKLINRLLGRPAAETAPTTEPGTPARKARAPKTPKARAKASAGGVPRAPRVWSVEEHG
IDPKLLSRNAVKVTSTLQEAGYGAFIVGGAVRDLLLGIKPKDFDVATNATPEQVEALFRR
SRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVESEQVPAGKRVKRTELDHHTHAVD
ASGRVLRDNVWGTQAEDATRRDFTVNAMYYNPADQTVHDYHHGMEDMRARLLRMIGDPHT
RYREDPVRMLRAVRFAAKTGFDIDPATRAPIAELGALIHNVPAARLFDEMLKLLMSGHAW
ASLQELRKAGLHRGLLPLLDVALEQPMGQRFVQLALDNTDERVKAGKPVSPGFLFASLMW
HHVLEHWNRRRAAGEPLIPALHEAMDEVLDRQTEQLAIQRRFTADMKEIWSMQPRFEKRA
GRMPHRLLESPRFRAGYDFLVLRCASGELPQELATWWTDFQNGDGEAREALIAQAKQAPA
AAGGAPAVAKRRRRRRGPAKSDTVADVSPGSSEGT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatcaatcgcctgctgggcaggcccgccgcggagaccgcgcccacc
accgagcccggcacgccggccaggaaggcccgcgctcccaagaccccgaaggcgcgcgcc
aaggccagcgccggcggcgtaccgcgcgcgccgcgcgtatggagcgtggaagagcacggc
atcgacccgaagctgctgtcgcgcaacgccgtcaaggtcacgtccacgctgcaggaagcc
ggctatggcgccttcatcgtgggcggcgcggtgcgcgatctgctgctgggcatcaagccg
aaggacttcgacgtcgccaccaacgccacgcccgagcaggtggaggcactgttccgccgc
tcgcgcatcatcggccggcgcttccagatcgtgcacgtgacgttctacggcgggcgcgag
caggaaatcatcgaggtgtcgaccttccgcgcgctggtcgacgccgtggaaagcgagcag
gtgccggccggcaagcgcgtcaagcgcaccgagctggaccaccacacccacgccgtcgac
gccagcggccgcgtgctgcgcgacaacgtgtggggcacccaggccgaggatgccacccgc
cgcgacttcaccgtcaacgcgatgtactacaacccggccgaccagaccgtgcacgactac
caccacggcatggaagacatgcgcgcgcgcctgctgcgcatgatcggcgacccgcatacg
cgctaccgcgaagacccggtgcgcatgctgcgcgcggtgcgcttcgcggccaagaccggc
ttcgacatcgacccggccacgcgcgccccgatcgccgagctgggcgcgctgatccacaac
gtgccggccgcgcggctgttcgacgagatgctcaagctgctgatgtcgggccacgcctgg
gcgtcgttgcaggagctgcgcaaggccggcctgcaccgcggcctgctgccgctgctggac
gtggcgctcgagcagccgatgggccagcgcttcgtgcaactggcgctcgacaacaccgat
gagcgcgtcaaggccggcaagccggtctcgcccggcttcctgttcgcctcgctgatgtgg
caccacgtgctggagcactggaaccgccgccgcgccgccggtgagccgctgatccccgcg
ctgcacgaggcgatggacgaagtcctcgaccgccagaccgagcagctcgccatccagcgc
cgcttcaccgccgacatgaaggagatctggagcatgcagccgcgcttcgagaagcgtgcc
ggccgcatgccccaccgcctgctcgaatcgccgcgcttccgcgccggctacgacttcctg
gtcctgcgctgcgcctcgggcgaattgccgcaggagctcgccacctggtggaccgacttc
cagaacggcgacggcgaggcgcgcgaagcgctgatcgcgcaggccaagcaggcgccggcc
gccgccggaggcgcccccgcggtcgccaagcgccgccgccgccggcggggtccggcaaaa
tcggatacagtcgccgacgtgagcccgggcagttcggagggaacgtga
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