Ralstonia solanacearum CMR15: CMR15_11141
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Entry
CMR15_11141 CDS
T02725
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03420
Nucleotide excision repair
rsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMR15_11141 (uvrD)
03430 Mismatch repair
CMR15_11141 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_11141 (uvrD)
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMR15_11141 (uvrD)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMR15_11141 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CMR15_11141 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CBJ37346
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All DBs
Position
1198714..1201098
Genome browser
AA seq
794 aa
AA seq
DB search
MSELLAHLNPEQRAAVTLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTF
TNKAAKEMNARLSAMLPINTRGMWIGTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKFPPKSVQYFINGAKEQGLRAGDLEIANEFDRRMADLYAAYDAQCQR
EGVVDFSELLLRCYELLRYNDAIRVHYQRRFKHILVDEFQDTNKLQYAWLKILAGLGEAG
VTPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVAHRIKLEQNYRSHGNILDTANHLI
AHNTRRLGKNLRTDAGHGEPVRVYPSATDGQEAGWIVEEIRERIASGTARSEIAILYRSN
AQSRVIEHALFSVGIPYKVYGGLRFFERAEIKHALAYLQLLENADNDAAFGRVVNFPARG
VGARSLEQLQDAAKLYGVSLAASVPYLTGAAGTKLAAFVRLIEQMRADTRQMTLPEIVQH
VIHASGLITHYQGEKEGLDRIENLQELVTAAQAFVAEEGYGVDAIATALPMRHDAMLRIE
GGETDSDAVTELVADETPTEMTPLVAFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEF
HVVFITGLEEGLFPHENSLQDTDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQIRYH
IRSRFFDELPEATLKWLTPPQAGYSPTRRAQGGQGGQGDSAWGREWFKRPERGDNEAYTG
RPTGGMDTGNTYADTKRAAGTGFRVGQSVFHSKFGEGVITTLEGEGADARAHIKFSRHGV
KVLALGIAKLDPIN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgctcgctcacctgaaccccgaacaacgcgctgccgtcacgcttcccgac
gagtcggcgctgatcctggccggggcgggcagcggcaagacgcgcgtgctgaccacccgc
atcgcctggctgatccagagcgctcgggtgtcgccgtcgggtgtgctggccgtcaccttt
accaacaaggcggccaaggagatgaacgcccggctgtcggccatgctgccgatcaacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccggctgctccgcgcgcactac
cgcgacgccgggctgccgcagaccttccagatcctcgatacgcaggatcagctctcggcc
gtcaagcgcctgctcaagtcgctgaacatcgacgatgagaagtttccgccgaagagcgtc
cagtacttcatcaatggcgccaaggagcagggcctgcgcgcgggcgacctggagatcgcc
aatgagttcgaccgccgcatggccgacctgtacgccgcctacgacgcgcagtgccagcgc
gaaggcgtggtcgacttttcagagctgctgctgcgctgctacgagctgctgcgctacaac
gatgcgatccgcgtgcactaccagcggcgcttcaagcacatcctggtcgacgaattccag
gatacgaacaagctgcaatacgcctggctgaagatcctggccggcctgggcgaggcgggc
gtcacgcccaacgccatcttcgccgtgggcgacgacgaccagagcatctacgccttccgt
ggcgccaacgtcggcaacatggtggacttcgagcgcgaattccgggtcgcgcaccgcatc
aagctggagcagaactaccgttcgcacggcaacatcctggacacggccaaccacctgatc
gcccacaacacccgccgcctgggcaagaacctgcgcaccgacgccggccatggtgagccg
gtgcgcgtctacccgtccgccaccgacgggcaggaggccggctggatcgtcgaagaaatc
cgcgagcgcatcgccagcggcacggcgcgctccgagatcgccatcctgtaccgcagcaac
gcgcagtcgcgggtgatcgagcatgcgctgttctcggtgggcattccctacaaggtgtac
ggcgggctgcgcttcttcgagcgtgccgaaatcaagcacgcgctggcctacctgcaactg
ctggagaacgccgacaacgatgccgctttcggccgcgtggtcaacttcccggcgcgcggt
gtcggggcgcggtcgctggagcagctgcaggatgcggccaagctgtatggcgtgtcgctg
gcggcatcggtgccgtacctgaccggcgcggcggggacgaagctggcggcgttcgtgcgg
ctgatcgagcagatgcgcgccgacacgcgccagatgacgctgcccgagatcgtccagcac
gtgatccacgccagcggcctcatcacgcattaccagggcgagaaggaaggcctcgaccgc
atcgagaacttgcaggaactggtgaccgccgcccaggccttcgtggccgaggagggctac
ggcgtcgatgccatcgccaccgcgctgccgatgcgccacgacgcgatgctgcgcatcgag
ggcggcgagacggacagcgatgccgtcaccgagctggtcgccgatgaaacgccgacggag
atgaccccgctggtcgccttcctgacgcatgcctcgctggaggccggcgacaaccaggcc
caggccggccaggacgcggtgcagctgatgaccgtgcacgccgccaaggggctggagttc
cacgtcgtcttcatcaccggcctggaggagggcctgttcccgcacgagaacagcctgcag
gacaccgacggcctggaagaagagcgtcgcctgatgtacgtggccatcacccgggcacgc
gagcgcctgtacctgtcgtttgcgcagagccgcgtgctgcacgggcagatccgctaccac
atccgttcgcgcttcttcgacgagctgccggaagcgacgctgaagtggctgacgccgccg
caggccggctacagccccacgcgccgagcccagggtggacagggcgggcagggcgatagc
gcctggggccgcgagtggttcaagcgccccgagcgcggcgacaacgaggcctacaccggc
cgcccgaccggcggcatggacaccggcaatacctacgccgacaccaagcgcgcggccgga
acgggcttccgcgtcggccagtcggtgttccacagcaagttcggggaaggcgtcatcacg
acgctggaaggcgagggcgccgatgcgcgcgcccacatcaagttcagccgccacggcgtg
aaggtgctggcgctgggcatcgccaagctggacccgatcaactga
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