Ralstonia solanacearum CMR15: CMR15_11146
Help
Entry
CMR15_11146 CDS
T02725
Symbol
polA
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03030
DNA replication
rsm03410
Base excision repair
rsm03420
Nucleotide excision repair
rsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMR15_11146 (polA)
03410 Base excision repair
CMR15_11146 (polA)
03420 Nucleotide excision repair
CMR15_11146 (polA)
03440 Homologous recombination
CMR15_11146 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsm03032
]
CMR15_11146 (polA)
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_11146 (polA)
Enzymes [BR:
rsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMR15_11146 (polA)
DNA replication proteins [BR:
rsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CMR15_11146 (polA)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CMR15_11146 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMR15_11146 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CBJ37351
LinkDB
All DBs
Position
1204453..1207332
Genome browser
AA seq
959 aa
AA seq
DB search
MSETPSGVPVTLESMGMSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNM
LRKLRNDYPAKYSACVFDAKGKTFRDDLYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWP
ILMVDGVEADDVIGTLAERATREGVRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGV
LAKFGVPPGKIVDYLSLIGDTVDNVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVV
GENLRNTLDWLPKGRELLTVKTDCDLATEVPTFAALIDGGEDRAKLVDFFGRYGFKTWLR
EASGESLPDTRSVGAARKAATPVKQYAPEAAAQQASLFDVEAPPAEVKYETVTTEAQLES
WMRLLDASALVCLDTETTSIDPMQAQLVGLSLSVEPGQACYIPVAHRGPDVSGLEAAGQL
AREAVLARMKPWLEDASRKKVGQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHG
MDALAERVLHLKTITYEEVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRAMYPKVA
EDDKLRYVYEQIEMPTSIVLQKMERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQP
FNLNSPKQIGEIFFTQLKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLK
STYTDKLPKMVNPQTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPA
GSVIVSADYSQIELRIMAHLSEDEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYA
KVINFGLIYGMSAFGLASNLGIGRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVET
VFGRRLWLPDINGGNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSTGKPG
APMRTRQVMQVHDELVLEVPQEELSLVRERLPELMCGVAALRVPLVAEVGVGANWEEAH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggaaacgccgtcgggcgttccagtcacattagagtccatgggaatgtcggaaagt
caagaaacgctgttgctcgtcgatggctcgagttatctgtaccgtgcttatcacgcactg
cccgacttgcgcaatggagaagggtttcctaccggggccatctacggcatcgtgaacatg
ctgcgcaaactgcgcaacgactacccggccaagtatagcgcttgcgttttcgacgctaaa
ggcaagaccttccgcgacgacctgtaccccgcctacaaggagcaccgggcgccgatgccc
gatgacctgcgccagcagatcgagccgatccacgaagccgtgcgcgcgctcggctggccc
atcctgatggtcgacggtgtggaggccgacgacgtgatcggtacgctggccgaacgcgcc
acccgcgagggcgtccgcaccgtcgtctcgaccggcgacaaggacctcgcccaactggtg
aacgaccatgtcacgctggtcaacaccatgagcaacgagacgctcgatccggccggcgtg
ctggccaagttcggcgtgccgcccgggaagatcgtcgactacctgtcgctgatcggtgac
accgtggacaatgtgccgggcgtgcccaaggtcggcccgaagacggcggtcaaatggctg
ggcgaatacggctcgctcgacagcgtgatcgcccgcgctggcgagatcaagggcgtggtc
ggcgagaacctgcgcaacacgctcgactggctgcccaagggccgcgagctgctgaccgtc
aagaccgattgcgatctcgccacggaagtcccgaccttcgcggccctcatcgatggcggc
gaggatcgcgccaagctggtcgacttcttcggccgctacggcttcaagacctggctgcgc
gaggccagcggcgaatcgctgccggatacccgcagcgtgggcgcggcgcgcaaggccgcc
acgcccgtcaagcaatacgcaccggaggccgcagcgcagcaggccagcctgttcgacgtc
gaagcgccgccggccgaagtcaaatacgaaaccgtcaccaccgaagcacagcttgaatcg
tggatgcggttgctggatgcgtcggcgctggtctgcctcgacaccgagacgacctcgatc
gatccgatgcaggcgcagctggtgggcctttcgctgtcggtcgagccgggccaggcgtgc
tacatcccggtcgcgcatcgcgggcccgatgtgtcggggctggaagccgccgggcagctc
gcgcgcgaggccgtgctggcgcgcatgaaaccgtggctggaggacgcctcccgcaagaag
gtcggtcagcatttgaagtacgacgcgcacgtgttcgccaaccacggcatcgcgctgcgc
ggcatcgcgcacgacaccatgctgcagtcgtacgtgctggcctcgcaccgcaaccacggc
atggacgcgctggccgagcgcgtgctgcatctgaagaccatcacctacgaagaggtctgc
ggcaagggcgcgtcgcagatcggcttcgatgaggtgccgctcgaccgcgccaccgaatac
gccgccgaggatgccgacatcacgctgcgcctgcaccgcgcgatgtatcccaaggtggcc
gaggacgacaagctgcgctacgtctacgagcagatcgagatgccgacctccatcgtgctg
cagaagatggagcgcaacggcgtgctgatcgatgccgagcgcctggccaggcagagcacc
gggctgggccagcgcctgctggagctcgagcagcaggcctatgcgctggccggccagccg
ttcaatctgaattcgcccaagcagatcggcgagatcttcttcacgcagctcaagctgccg
gtcatcaagaagaccgccagcggtgcgccgtcgaccgacgaagaggtgctgcagaagctg
gccgaagactacccgctgcccaagctgctgctcgacttccgcggcctggccaagctcaag
tccacctacaccgacaagctgccgaagatggtcaacccgcagaccggccgggttcacacc
acctacgggcaggcgaccgccgtcacgggccggctggcctcgaccgatccgaacctgcag
aacatcccggtgcgtacggaagaagggcggcgcatccgcgaagcgttcgtcgcgccggcg
ggcagcgtgatcgtctcggccgactactcgcagatcgagctgcgcatcatggcccacctg
tccgaggacgaaggcctgttgcgcgccttccgcgagggccaggacgtgcaccgcgccacc
gcggccgaagtcttcggcgtgacgccgctggaggtcacggccgagcagcgccgctacgcc
aaggtcatcaacttcggcctcatctacggcatgagcgcgttcgggctggcgagcaacctt
ggcatcggccgcgatgccgccaagctctatatcgaccggtatttcgcgcgctaccccggc
gtggcccgctacatggacgagacccgcctggtcgcgcatgagcgcggctacgtcgagacg
gtgttcggccgccgcctgtggctgcccgacatcaacggcggcaacggcccgcgccgccag
gccgccgagcgcgccgccatcaatgcgcccatgcagggcaccgccgccgacctcatcaag
ctgtcgatgctggccgtgcaggactggctggatggctcgcccagcaccggcaagcccggc
gcgccgatgcgcacgcgccaggtcatgcaggtgcacgatgaactggtgctggaagtcccg
caggaagagctgtcgctggtgcgcgagcgcctgcccgagctgatgtgcggcgtggcggcg
ctgcgcgtgccgctggtggccgaggtgggcgtcggcgcgaactgggaagaggcgcactga
DBGET
integrated database retrieval system
