Ralstonia solanacearum CMR15: CMR15_11309
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Entry
CMR15_11309 CDS
T02725
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMR15_11309 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsm03019
]
CMR15_11309 (pnp)
03016 Transfer RNA biogenesis [BR:
rsm03016
]
CMR15_11309 (pnp)
Enzymes [BR:
rsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CMR15_11309 (pnp)
Messenger RNA biogenesis [BR:
rsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CMR15_11309 (pnp)
Transfer RNA biogenesis [BR:
rsm03016
]
Prokaryotic type
tRNA degradation factors
CMR15_11309 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_NusA_2nd
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
CBJ37512
LinkDB
All DBs
Position
1369729..1371882
Genome browser
AA seq
717 aa
AA seq
DB search
MFNKIVKEFQWGNHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSI
NPEVPADIPALVAASAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLVVA
GTERAVLMVESEAQQLSEEVMLGAVVYGHEQMQIAINAIHDMVRDGGKPEWDWQAAPKNE
ALVAKVSELGLADLQAAYQLRQKSARSQKLKEVYASVAAKLAEAGVDADGVEVDNILFEL
ESKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGTKS
DEQIIDALQGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKDDE
FAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVLTD
ILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQAA
MGHARTELSEHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIQEDGTITIAST
SSEGMAEAKRRIEGITAEAEVGKIYSGTVLKLLDFGAIVNILPGKDGLLHISEIANERVN
QVSDYVKEGQMVRVKLLSTDEKGRMRLSIKAAKAEEGDVPAAAPQAPGAGDATSQQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcgtcaaggaattccagtggggcaaccacaaggtgcgcatggagacg
ggcgagatcgcccgccaggccagcggcgccgtgctgctcgacatggacgacaccgtggtg
ctggccaccgtggtgggcgccaagaacgccaagccgggccaggatttcttcccgctgacc
gtcgactacatcgagaagacctacgccgccggcaagatcccgggtggcttcttcaagcgt
gaaggccgtccgtcggaaaacgagacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtcgtcatccacgtgctgtcgatc
aacccggaagtgccggccgacatcccggcgctggtggccgcttcggccgcgctggccgtg
tcgggcctgccgttcaacggcccggtgggcgccgcccgcgtgggttacaaggatggccag
tacctgctgaacccgaaccgtgcgcaactggcgcattcggacctggacctggtcgtggcc
ggcaccgagcgtgccgtgctgatggtcgaatcggaagcacagcaactgtcggaagaggtc
atgctgggcgccgtggtgtacggccatgagcagatgcagatcgccatcaacgcgatccac
gacatggtgcgcgacggcggcaagccggagtgggactggcaagcggctccgaagaacgaa
gccctggtcgccaaggtgtccgaactgggcttggccgatctgcaagccgcttaccaactg
cgccagaagtcggcccgcagccagaagctgaaggaagtctacgcatcggtcgcggccaag
ctggccgaagccggcgtggatgccgacggcgtggaagtcgacaacatcctgttcgagctc
gaatcgaagatcgtgcgcggccagatcctgaacggcgaaccgcgtatcgacggccgcgac
acccgcacggtgcgcccgatcgagatccgctcgtcggtgctgccgcgcgcgcacggctcg
gcgctgttcacgcgtggtgagacgcaagcgctggtggtggccacgctgggcaccaagagc
gacgagcagatcatcgacgcgctgcagggcgagtaccgcgaccgcttcatgctccactac
aacatgccgccgttcgccaccggcgaaaccggccgcgtgggcagcccgaagcgccgcgaa
atcggtcacggccgcctggccaagcgcgcgctgatcccggtgctgccgaaggacgacgaa
ttcgcctacacgattcgcctggtgtcggagatcaccgagtcgaacggctcgtcgtcgatg
gcttccgtctgcggcggctgcctggcgctgatggatgccggcgtgccggtcaaggcgcac
gtggccggcgtggccatgggcctgatcctggaaggcaacaagttcgccgtgctgaccgac
atcctgggcgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgataac
ggtatcaccgcactgcagatggacatcaaggtgcagggcatcaccaaggaaatcatgcag
gtggcactggcgcaagccaaggaaggccgtctgcatatcctgggcaagatgcaggccgcg
atgggccatgcacgcaccgaactgtcggagcatgcgccgcgcatgatcaccgtcaagatc
aatccggagaagatccgcgacgtgatcggcaagggcggctcgaccatccaggcactgacc
aaggaaaccggctgcacgatcgacatccaggaagacggcacgatcaccatcgcgtcgacc
tcgtccgagggcatggccgaagccaagcgccgcatcgaaggcatcacggccgaagccgaa
gtgggcaagatctacagcggcaccgtgctcaagctgctggacttcggcgcgatcgtcaac
atcctgccgggcaaggacggcctgctgcacatctcggagatcgccaacgagcgtgtcaac
caggtgtcggactacgtcaaggaaggtcagatggtgcgcgtgaagctgctgagcaccgac
gaaaagggccgcatgcgcctgtcgatcaaggccgccaaggctgaggaaggcgatgtgccg
gccgccgcgccgcaggcgccgggcgccggcgacgctacgtcgcagcagcagtaa
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