Ralstonia solanacearum CMR15: CMR15_11380
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Entry
CMR15_11380 CDS
T02725
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, catalytic and NAD/flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm00020
Citrate cycle (TCA cycle)
rsm00190
Oxidative phosphorylation
rsm00650
Butanoate metabolism
rsm00720
Other carbon fixation pathways
rsm01100
Metabolic pathways
rsm01110
Biosynthesis of secondary metabolites
rsm01120
Microbial metabolism in diverse environments
rsm01200
Carbon metabolism
Module
rsm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsm_M00149
Succinate dehydrogenase, prokaryotes
rsm_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMR15_11380 (sdhA)
00650 Butanoate metabolism
CMR15_11380 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CMR15_11380 (sdhA)
00720 Other carbon fixation pathways
CMR15_11380 (sdhA)
Enzymes [BR:
rsm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CMR15_11380 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
FAD_binding_3
HI0933_like
Thi4
GIDA
NAD_binding_7
Lycopene_cycl
RovC_DNA-bd
Pyr_redox_3
FAD_oxidored
ThiF
Motif
Other DBs
NCBI-ProteinID:
CBJ37583
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All DBs
Position
1439043..1440821
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AA seq
592 aa
AA seq
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MVAVKTGLPRRKFDVVIVGAGGAGMRASLQLAEAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCRQAPNVVYELEHFGMPFDRNADGTIY
QRPFGGHTSNYGEKPVQRACAAADRTGHALLHTLYQRNVRAKTHFFVEWMALDLIRDQDG
DVLGVTALEMETGEVYILEAKTTLFATGGAGRIYAASTNAFINTGDGLGMAARAGVPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLTHVGAETIMKRLPSIREIGLKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYHGQVVVPKNGSPNEVVNGFYAIGECSCVSVHGANRLGTNSLLDLVVFGRSAG
NHIVAQNLKNREHKPLPADAADRALARLAKLDSSSSGEYAQDVANDIRRNMQSHAGVFRT
QKLMDEGVERIMEVTERAANIHLKDKSKVFNTARVEALEVANLVEVAKATMVSAAARRES
RGAHAHSDFPNRDDENWLKHTLFYSEGNRLEYKPVQMKPLSVESVPPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagtcaagactgggctgccgcgccgcaagttcgacgttgtgatcgtcggcgcg
ggcggcgcgggcatgcgcgcatcgctgcagctcgctgaagccggcctttccgtggccgtg
ctgtccaaggttttccccacccgctcgcacaccgtggcagcgcagggtggcatcggtgct
tcgctgggcaacatgagcgaagacaactggcactatcacttctacgacaccatcaagggt
tccgactggctcggcgaccaggatgcgatcgagttcatgtgccgccaggcgccgaatgtg
gtctatgaactggaacacttcggcatgccgttcgaccgcaacgccgacggcaccatctac
cagcgcccgttcggcggccacacgtccaactacggtgagaagccggtgcagcgtgcctgc
gccgcggctgaccgtactggccacgcgctgctgcacacgctgtatcagcgcaacgtgcgc
gccaagacccacttcttcgtcgaatggatggcgctggacctgatccgcgaccaggacggc
gacgtgctgggcgtgaccgcgctggaaatggaaaccggcgaggtctacatcctcgaagcc
aagaccacgctgttcgccacgggcggcgccggccgtatctacgcagcttccaccaacgcc
ttcatcaacaccggggatggcctgggcatggcggcgcgtgccggcgttccgctggaagac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgaa
ggcgtgcgcggcgagggcggtatcctgcgcaacaaggacggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgctcgatggaccag
gaaatcaaggaaggccgcggctgcggtccgaacggcgactacgtgctgctcgacctgacc
cacgtcggcgccgagaccatcatgaagcgcctgccgtccatccgcgagatcggcctgaag
ttcgccaacgtggacgccatcaaggaaccgatcccggtggtgccgaccatccattaccag
atgggcggtattccgaccaactatcacggccaggttgtggtgccgaagaacggcagcccg
aacgaagtcgtgaacggcttctacgcgatcggcgaatgctcgtgcgtgtcggtgcacggc
gccaaccgcctgggcacgaactcgctgctcgacctggtggtgttcggccgctcggccggt
aaccacatcgtcgcgcagaacctgaagaaccgcgaacacaagccgctgccggccgatgcc
gccgaccgcgcgctggcccgcctggccaagctggacagctccagctcgggcgagtacgcg
caggacgtcgccaacgacatccgccgtaacatgcagtcgcatgccggcgtgttccgcacg
cagaagctgatggacgaaggcgtcgagcgcatcatggaagtgaccgagcgcgccgccaac
atccacctgaaggacaagtccaaggtgttcaacaccgcgcgcgtcgaagcgctggaagtg
gccaacctggtggaagtcgccaaggcgacgatggtgtcggccgccgcccgcagggaatcg
cgtggtgcacacgcccacagcgacttcccgaaccgcgacgacgagaactggctcaagcac
acgctgttctacagcgaaggcaaccgcctcgagtacaagcccgtgcagatgaagccgctg
tcggtggaaagcgtgccgcccaaggcgcggaccttctaa
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