Ralstonia solanacearum CMR15: CMR15_20032
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Entry
CMR15_20032 CDS
T02725
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm00541
Biosynthesis of various nucleotide sugars
rsm01100
Metabolic pathways
rsm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CMR15_20032 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rsm01005
]
CMR15_20032 (rfaD)
Enzymes [BR:
rsm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CMR15_20032 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rsm01005
]
Core region
CMR15_20032 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
CBJ38077
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All DBs
Position
1987008..1988003
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AA seq
331 aa
AA seq
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MTIIVTGAAGLIGANLVKGLNDRGETDIIAVDNLTRADKFRNLVDCEISDYLDKTEFVER
FARGDFGKVRAIFHEGACSDTMETDGRYMMENNYRYTLALMKACLDQGVQFLYASSAATY
GASDTFREDRAFEKPLNVYGYSKFLFDQIVRRTLPGALSQIVGFRYFNVYGPREQHKGRM
ASVAFHNFNQFRAEGTVKLFGEYNGYPQGGQMRDFVSVEDVVKVNLFFFDHPDKSGIFNL
GTGRAQPFNDIATTVVNTLREAEGKPALSTEELAQEGLIEYVKFPDALRGKYQCFTQADQ
SKLRAAGYTAPFLTVQEGVARYSRWLMAQPA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtgaccggcgcggccggcctcatcggcgccaacctcgtcaagggcctc
aatgaccgcggcgagaccgacatcatcgcggtcgacaacctgacccgcgccgacaagttc
aggaacctggtcgactgcgagatcagcgactacctggacaagaccgagttcgtcgagcgc
ttcgcgcgcggcgacttcggcaaggtccgcgcgatcttccacgagggcgcctgctccgac
accatggagaccgacggccgctacatgatggagaacaactaccggtacacgctcgcgctg
atgaaggcctgcctggaccagggcgtgcagttcctctatgcatcgtcggcggccacctat
ggcgcgtcggacaccttccgcgaggaccgcgcgttcgagaagccgctcaacgtgtacggc
tactccaagttcctgttcgaccagatcgtgcgccgcacgctgccgggcgcgctgtcgcag
atcgtcggcttccgctatttcaacgtctacggcccgcgcgagcagcacaaggggcgcatg
gcgtcggtggccttccacaacttcaaccagttccgcgcggaaggcaccgtcaagctgttc
ggcgagtacaacggctatccgcagggcggccagatgcgcgacttcgtgtcggtggaagac
gtggtcaaggtcaacctgttcttcttcgaccatccggacaagtcgggcatcttcaacctc
ggcaccggccgcgcccagccgttcaacgacatcgcgaccaccgtggtgaacaccctgcgc
gaggccgagggcaagccggcgctctcgaccgaagagctggcgcaagagggcctgatcgaa
tacgtgaagttccccgatgcgctgcgcggcaaataccagtgcttcacccaggcggaccag
agcaagctgcgtgcggccggctacaccgcgccgttcctgaccgtgcaggaaggcgtggcg
cgctacagccgctggctgatggcccagccggcctga
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