Ralstonia solanacearum CMR15: CMR15_20181
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Entry
CMR15_20181 CDS
T02725
Symbol
rnc
Name
(GenBank) Ribonuclease III (RNase III)
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CMR15_20181 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsm03019
]
CMR15_20181 (rnc)
03009 Ribosome biogenesis [BR:
rsm03009
]
CMR15_20181 (rnc)
03036 Chromosome and associated proteins [BR:
rsm03036
]
CMR15_20181 (rnc)
Enzymes [BR:
rsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CMR15_20181 (rnc)
Messenger RNA biogenesis [BR:
rsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CMR15_20181 (rnc)
Ribosome biogenesis [BR:
rsm03009
]
Eukaryotic type
90S particles
RNase
CMR15_20181 (rnc)
Prokaryotic type
rRNA processing factors
CMR15_20181 (rnc)
Chromosome and associated proteins [BR:
rsm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CMR15_20181 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
RxLR_effector
Motif
Other DBs
NCBI-ProteinID:
CBJ38226
LinkDB
All DBs
Position
2137743..2138513
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AA seq
256 aa
AA seq
DB search
MSLEALQQRLDYRFSKPELLQQALTHRSHNAMHNERLEFLGDSILNCAVADMLYGMFGKL
DEGDLSRVRANLVKQQALYEIAQMLLLPDELRLGEGELKSGGFRRPSILADALEAIFGAV
FLDGGFDAARTLIRKLYIPILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYAVVATHGAA
HNQQFEVECTIPKLEIRVSGSGASRRAAEQSAAKLALEEAHRLVPQLVKRSRAERTGKTR
KQATPPDPQLSLRLKE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggaagcattgcagcaacgccttgactatcgcttcagcaaaccggagttgctg
cagcaggcgctcacgcatcgcagccacaacgcgatgcacaacgagcgcctggaatttctt
ggtgattcgatcctgaattgcgccgtggcggacatgctctatggcatgttcggcaagctg
gacgagggcgatctgtcgcgcgtgcgggccaatctggtcaagcagcaggcgctgtacgag
atcgcgcagatgctgctgttgccggacgagctgcggctgggcgagggtgagctcaagagt
ggtgggttccgccggccgtcgatcctggccgatgcgctggaggcgatcttcggcgcggtg
ttcctcgatggcggcttcgatgcggcccgcaccctgatccgcaagctgtacatcccgatc
ctggagcaggtcgatccgcgcacgctgggcaaggacgccaagacgctgctgcaggagtat
ctccagggtcataaaatcgcgctgccgcaatacgccgtggtggccacgcacggcgcggcg
cataatcagcaattcgaggtcgagtgcacgatcccgaagctggagatccgtgtctccggc
agcggggcatcgcggcgcgcggccgagcagtcggcggccaagctggccctggaagaagcg
catcgcctggtgccgcagctcgtcaagcgcagccgcgccgagcgcaccggcaagacgcgc
aagcaggccacaccgccggatccgcagttgtctctcaggttgaaggaatga
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