Ralstonia solanacearum CMR15: CMR15_20319
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Entry
CMR15_20319 CDS
T02725
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03410
Base excision repair
rsm03430
Mismatch repair
rsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMR15_20319 (recJ)
03430 Mismatch repair
CMR15_20319 (recJ)
03440 Homologous recombination
CMR15_20319 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_20319 (recJ)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CMR15_20319 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CMR15_20319 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CMR15_20319 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
PAP2
Motif
Other DBs
NCBI-ProteinID:
CBJ38362
LinkDB
All DBs
Position
complement(2243386..2245083)
Genome browser
AA seq
565 aa
AA seq
DB search
MTRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDA
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
VALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKHLAGVGVMFYVLLALRAELRRRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVSGREARRASTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMTILSSTLANMDSAGRHTIAVYN
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDTLDAVHKRCPGL
IVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLNESLLSRVLETDGEAEAECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASA
YVAYRLDNNTFNGITRVQMVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgccatccgcccgcattccgccgagaccgccagcctgctggccggccac
ggcatccatcccatcctggcgcgcatcctggccgcgcgcggcgtggcccgccccagcgaa
ctgtcgactgaactgaccgacctgctgccgcccgcgcagctcaagggcatcgacgacgcg
gcgcgctacctggccgacgcgatcgccgccggcaagcgcctgctgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcgtacgcgggctgcgcatgctgggcgcg
caggtcggctacatcgtgcccaaccgcttcgagtacggctacggcctgtcgcccgagatc
gtcgcgctggccgcgcgcgagcggccagacgtgctcgtcaccgtcgacaacggcatcgcc
gacgtggcgggcgtggcggcggccaacgcgctgggcatcgacgtcgtcgtcaccgatcac
cacatgccgggcgcgcagctgcccgaggcccgcgtgatcgtcaacccgaaccagccgggc
tgcggctttccgagcaagcacctggcgggcgtgggcgtgatgttctacgtgctgctggcg
ctgcgggccgagctgcgccgccgcggcgccttcacgccgcagaaccagccgcgccttgat
gcgctgctcgacctggtggcactcggcaccgtggccgacgtggtgcggctcgatgccaac
aaccggctgctggtggcgcagggcctcaagcgcatgcgcgcgggccggatgtgcgccggc
atcgcggcgctgttccgagtgtccgggcgcgaggcgcggcgcgcatccaccttcgacctc
ggcttcggcctgggcccgcgcctgaacgccgccggccgcctggccgacatgtcgctcggc
atcgaatgcctgctgaccgacgatttcgaccgcgccatggccatcgccgccgagctcgac
ggcatgaaccgggagcgccgcgaaatcgaggccggcatgcagcaggaggccatgacaatc
ctctcgtccacgctggccaacatggacagcgccggccgccacaccatcgcggtctacaac
gagacctggcaccagggcgtgatcggcatcgtcgcctcgcggctcaaggacaagttccac
cggccggtgatcaccttcgcgccgggcgacgacggcgtcatcaagggctcgggccgctcc
atccccggcttccacctgcgcgatacgctggacgccgtgcacaagcgctgccctgggctg
atcgtcaagttcggcggccacgcgatggcggccgggctgtcgctgcatgcggacggcttc
gaccgctttgtcgagaccttcgaggcggtcggccgcgaatggctgaacgaatccctgctc
tcgcgcgtgctcgaaaccgacggcgaggccgaagcggagtgcttcacgccgcagttcgtg
gagctgctcgaaacccacgtctggggccagggctttccggcgccgagcttctgcggcgag
ttcgacgtgctgtcgcaggccgtgctcaaggacaagcacctgaagctgcagctcgggcgc
ggcaagcagcgcttcgatgcgatctggttcaaccacgcagagccgctcggcgcctcggcg
tacgtggcctatcggctggacaacaacaccttcaacggcatcactcgcgtgcagatggtg
atcgagcacgcgcagtag
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