Ralstonia solanacearum CMR15: CMR15_20395
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Entry
CMR15_20395 CDS
T02725
Name
(GenBank) putative helicase, C_term RecB family exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_20395
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMR15_20395
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CMR15_20395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CBJ38438
LinkDB
All DBs
Position
2326872..2329772
Genome browser
AA seq
966 aa
AA seq
DB search
MQTLAFAPGPAFLPHAADAAWRFFDAHATDAPGAGVVVVPTAAQIPGVRGALHASAQAAG
ALRLLPRILTLGHWLLDLPPEADLPAARSTLSRLLAVQQALKTQAWLREALGAQDEAALW
GVAQVLVTVSDELSQRWLTLDAADSETDGRHDALETALSTALERTYAQLSERFLGTESRI
VLTFWRLLSGASDPIPVRLRAMRRLLDALRGPVVWMSPTDPEGADLDFLTRAAGRVPVLR
IGYDWQAREPVAEAAAPATHGAFRTLLLHAWPECGTVAPQAVEASTEAERPPPGLRIASA
ARFEDEAAFAAHTLVDWLNAGRRSLALVAQDRIVARRVRALLARVNVPVRDETGWKLSTT
RAAAALMRWIDVVQGDGDTAALLDLLKSPFCLRDAEAPSSVAPAWVAELERRVRRRNVSG
GWGRLRRLVAPRGTDTEVAEAADTGDGPPAGRLAERLGLLADEAALWRRAGHATLEAWVT
LLAGTLDRLRMRAGLQNDDAGRQLLDWLDRLRVSVHGSADAGARFSLQEWRALLSMLLES
AVFSEPAPPADRRVVILPLNGARMRRFDGVVVVGCDDAQLPSAQPEWLFFSNDVRRELGL
PDRAQRFAQQARDLAEVLLNQPEVVLTWQRHGGRGEPNRLSGWLERLQRRLAAAGMRIDV
PVVLPALQTARQPTDMPAPAAPVLVPSTLSAAAYNSLRRCPYQFFVGRMLRLGELEEVSD
ELEKRDIGEVLHAILHRFHRQLLDTPMADPVDRFALLQTLTDERFAPLLAEDGHVLRFYR
RWQGVMPSYLAWQAAREADGWRFEAGEVDAEASIALTGAPALHLRGRIDRIDTHPEHGVA
VLDYKTQSPIALARKVKAPFEDCQLPFYGLLDARAGAGGWVSLDGEARGDKRETGLPDFT
EVVGWLTEQMGKDMSALAAGAPLPAFGDESACRYCAARGLCRKGYWTDGAPREPQPQQEP
EAEGQP
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgcttgcctttgcgcccggcccagcattcctgccgcacgccgccgatgccgcg
tggcggttcttcgatgcccatgccacggatgcccctggcgccggcgtggttgtggtgccg
accgccgcgcagatccccggcgtgcgcggcgccctgcatgccagcgcccaggcggccggc
gcgctgcgcctgctgccgcgcatcctgacgctggggcactggctgctcgacctgccgccg
gaggccgacctgcccgcggcgcgcagcacgctgtcgcgcctgctggcggtgcagcaggcg
ctgaagacgcaggcctggctgcgggaggcattgggggcgcaggatgaggcggcgttgtgg
ggcgtggcgcaggtgttggtgacggtatcggacgagctgtcgcaacgctggctcacgctc
gatgccgccgacagcgagaccgacgggcggcacgacgcgctggagacggcgctgtccacc
gcgctggagcgcacctacgcgcagctgtccgagcgctttctcgggaccgagtcgcgcatc
gtgctgacattctggcggctgctgtcgggcgcgtccgatccgatcccggtgcggctgcgt
gccatgcggcgcctgctcgatgcgctgcgcggccccgtggtctggatgagcccgaccgat
cctgagggcgctgatctcgatttcctgacgcgcgcggctggccgcgtgccggtgctgcgt
atcggctacgactggcaggcgcgcgagcccgtggcggaggcggccgcgccggcgacgcat
ggcgcgttccgcaccctgctgctgcacgcctggccggaatgcggcacggtcgctccgcag
gcggtggaggcatcgaccgaagctgaacggccgcctcccgggctgcgcatcgccagcgcg
gcccgcttcgaggacgaggccgccttcgccgcccacacgctggtcgactggctcaacgcc
gggcgccggtcgctggcgctggtggcgcaggaccgcatcgtcgcgcgccgggtacgcgcg
ctgctggcacgcgtgaacgtgccggtgcgggacgagaccggctggaagctgtcgaccacg
cgcgccgccgccgcgctgatgcgctggatcgatgtggtgcagggcgacggcgataccgcc
gcgctgctcgatctcctcaagagcccgttctgcctgcgcgatgccgaggcgccgtcatcg
gtcgcgccggcctgggtggccgagctggagcgccgcgtgcgccggcgcaacgtgtcgggt
ggatgggggcgcctgcgccgcctggtcgcgccgcgcggcacggataccgaggtcgccgag
gccgccgataccggtgatgggccgccggccggccgcctggccgagcgcctcggcctgctc
gccgacgaagccgcgctgtggcgccgcgccggccatgccacgctggaagcgtgggtcacg
ctgctggccggcacgctggaccgcctgcgcatgcgcgccggtctgcagaacgacgatgcc
ggacgccagttgctcgactggctcgaccgcctgcgcgtctcggtgcatggcagtgccgat
gccggtgcgcgcttctcgctgcaggagtggcgcgcgctgctgtcgatgctgctggaatcg
gcggtcttcagcgagcccgcgccgccggcggatcgccgggtcgtgatcctgccgctcaac
ggcgcgcgcatgcgccgcttcgacggcgtggtggtggtcggctgcgacgatgcgcaactg
ccgtccgcgcagcccgaatggctgtttttctccaacgacgtccgccgcgaactgggtctg
cccgaccgcgcccagcgctttgcccagcaggcgcgcgacctcgccgaggtgctgctcaac
cagcccgaggtcgtgctgacctggcagcgccacggtgggcgcggcgaacccaatcgcctg
tcggggtggctcgagcgcctgcagcgcaggctggccgcggccggcatgcgcatcgacgtg
ccggtcgtgctgccggccttgcagacggcccgccagccgaccgacatgcccgcgccggcg
gcgcccgtgctggtgccgtccaccctgagcgcggccgcttacaacagcctgcgccgctgc
ccctaccagttcttcgtcggacgcatgctgcggctgggcgagctggaggaggtgtccgac
gaactcgagaagcgcgacatcggcgaagtgctgcacgcgatcctgcatcgtttccaccgc
cagttgctcgacacgccgatggccgatccggtcgaccgcttcgcgctgctgcagacgctc
accgacgagcgcttcgccccgctgctggccgaagacggccatgtgctgcgcttctaccgg
cgctggcagggcgtgatgccgtcctacctggcctggcaggcggcgcgcgaggcggacggc
tggcgcttcgaggccggcgaggtcgatgccgaggcgtcgatcgcgctgaccggcgcgccg
gcgctgcacttgcgcgggcgcatcgaccgcatcgacacgcacccggaacacggcgtggca
gtgctggactacaagacgcaatcgccgatcgccctggcgcgcaaggtgaaggcaccgttc
gaggattgccagctcccgttctacggcctgctcgacgcgcgtgccggggcgggcggttgg
gtctcgctcgacggcgaggcgcgcggcgacaagcgcgagaccggtctgccggatttcacc
gaggtggtcggctggttgaccgaacagatgggcaaggacatgagcgcgctggccgccggc
gcgccgcttccggcattcggcgatgaatcggcgtgccgctactgtgccgcacgtggcctg
tgccgcaagggctactggaccgacggcgcgccgcgcgagccgcagccgcagcaggaaccg
gaggcggagggccagccatga
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