Ralstonia solanacearum CMR15: CMR15_20397
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Entry
CMR15_20397 CDS
T02725
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03030
DNA replication
rsm03430
Mismatch repair
rsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMR15_20397 (dnaX)
03430 Mismatch repair
CMR15_20397 (dnaX)
03440 Homologous recombination
CMR15_20397 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsm03032
]
CMR15_20397 (dnaX)
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_20397 (dnaX)
Enzymes [BR:
rsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMR15_20397 (dnaX)
DNA replication proteins [BR:
rsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMR15_20397 (dnaX)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMR15_20397 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
DUF3646
AAA_22
AAA_16
AAA_18
AAA_14
AAA_30
Herpes_Helicase
nSTAND3
AAA_2
AAA_19
TsaE
PIF1
Mg_chelatase
AAA_28
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
CBJ38440
LinkDB
All DBs
Position
2333508..2335799
Genome browser
AA seq
763 aa
AA seq
DB search
MQIARRARADPGTWCVGKRVGNPPCFATIRRMSYQVLARKWRPRDFTTLVGQEHVVKALT
HALEQQRLHHAYLFTGTRGVGKTTLSRILAKSLNCIGTDGQGGITAQPCGVCRACTEIDA
GRFVDYIEMDAASNRGVDEMAQLLDRAVYAPTAGRFKVYMIDEVHMLTNHAFNAMLKTLE
EPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPPGHIVSHLDRILGEEGIAHEPNALR
LLASAAQGSMRDALSLTDQAIAYSAGEVSEAAVRGMLGAIDQSYLVRVLDALADENGAAL
IEIADEMAGRSLSFSGALQDLASLLQKIALAQVVPAAVQDDWPEADDIRRLAERFDAQSV
QLFYQFANLGRNELALAPDEYAGFTMTLLRMLAFQPGQSGGDAVPPSGGGKHAVPSAGVQ
GGSSRPVVAAAATGPVAQAVPAARAELVVEAPRATYQVDSPAAAAPAAAPVAATPVPAPA
GAPARRSPALEALAAARQASSRGARGGAAAPASAPAPVPAPAARPAAAGPRPNPAAVPAP
SPSPARREPVAASAPADDFGPPPWEEMPDEFASPSLDQIDAAFAGWDAASTTRPGAQAAA
ARPAQSEPPAAAPVPARAAAPEPVAAAVPPDLSASGLTAFDGDWPTLAARLPLRGLAQQL
AHQSELVSVEGATVRLRVPLPALTEANVLERLEAALTEHFGTPVRVVCDIGAVRATAAAV
DAEQRAQRQRDAESAIAADPFVQALVRDFAATVVPGSIQPHAH
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatcgctcggcgcgcccgggcagatccggggacatggtgcgtcggaaagcgcgtc
ggaaatcccccctgctttgctacaatccgccgcatgagttatcaagtgctcgcccgcaag
tggcgcccccgcgatttcaccacgctggtcggtcaggaacacgtggtgaaggcgctcacg
catgcgctcgaacagcagcgcctgcaccacgcatacctgttcacgggcacgcgcggtgtc
ggcaagacgacgctgtcgcgcattctcgccaaatcgctcaattgcatcggcacggacggg
cagggcggcatcaccgcgcagccgtgcggcgtgtgccgcgcctgcaccgaaatcgatgcc
gggcgcttcgtcgattacatcgagatggacgccgcctccaaccgcggcgtcgacgagatg
gcgcagctgctcgaccgcgcggtctacgcaccgacggccggccgcttcaaggtctacatg
atcgacgaagtgcacatgctgaccaaccacgccttcaacgcgatgctgaagacgctggag
gagccgcccgagcacgtcaagttcatcctcgcgaccaccgacccgcagaagattcccgtc
acggtgctgtcgcgctgcctgcagttcaacctgaagcagatgccgccgggacacatcgtg
tcccacctggaccgcatcctcggcgaggaaggcatcgcgcacgagcccaatgcgctgcgc
ctgctggcctcggccgcgcaggggtcgatgcgcgacgcgctgtcgttgaccgatcaggcc
attgcgtacagcgccggcgaagtctcagaggcggctgtgcgcggcatgctgggcgcgatc
gaccagagctatctggtgcgcgtgctcgatgcgctcgccgacgagaacggcgcggcactg
atcgagatcgccgacgagatggccgggcgcagcctgagcttctcgggggcgttgcaggat
ctggcttcgctgctgcagaagatcgcgctggcacaggtcgtgcccgccgccgtgcaggac
gactggcccgaggccgacgacatccgccgcctggccgagcgcttcgatgcgcagtcggtg
caactgttctaccagttcgccaaccttggccgcaacgagctggcgctggcgcccgacgaa
tacgccggcttcacgatgacgctgctgcgcatgctggcgttccagcccggccagtcgggc
ggcgatgcggtgccgccgtcgggtggcggcaagcatgccgtgccgtcggccggcgtgcag
ggtggatcgtcgcggccggttgtggcggccgctgccaccgggccggtcgcccaggcggtg
cctgctgcgcgtgcggagctggtggtcgaggcaccgcgtgcgacgtatcaagtcgattcg
ccggccgccgccgcaccggctgcggcacccgtcgcggcaacgccggttccggctccggcc
ggcgcaccggcccgccgctcgccggcgctggaagcgctggccgcggcgcgccaggcgtcg
agccggggtgcgcgcggcggtgccgctgcaccggcttccgcgcctgcccccgtgccggcg
ccggccgcacgcccggcagcggccggtccgcgcccgaatccggcggctgtgcctgcgccc
tcgccgtcgccggcgcgccgtgaaccggtcgccgcgtccgcgcctgccgacgactttggc
ccgccgccctgggaggagatgcccgacgagttcgcttcgccgtctctcgatcagatcgac
gccgcgttcgccggctgggacgcggcttcgaccacgcgcccgggcgcgcaggctgctgcc
gcgcgtcctgcgcagagcgagccgcccgccgcggcaccggtgccggccagggctgccgcg
ccggagccggtggccgccgccgtgccgcccgacctgagcgccagcggcctgacggccttc
gacggcgactggcccacgctcgcggcacgcctgccgctgcgcggcttggcgcagcagctg
gcgcaccagagcgaactggtctcggtggaaggcgcgacggtgcgcttgcgcgtcccgctg
ccggcactgaccgaggcaaacgtgctcgaacggctggaggcggcactgacggagcacttc
ggcacgccggtccgcgtggtctgcgacatcggtgccgtccgggccacggccgccgccgtc
gatgccgagcagcgtgcccagcgccagcgcgacgccgagtccgccatcgccgccgatccg
ttcgtgcaggcgctggtccgggactttgccgcgaccgtcgtgcccggctcgatccagccg
cacgcgcactga
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