Ralstonia solanacearum CMR15: CMR15_20412
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Entry
CMR15_20412 CDS
T02725
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsm03021
]
CMR15_20412 (rpoS)
Transcription machinery [BR:
rsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMR15_20412 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
KORA
Motif
Other DBs
NCBI-ProteinID:
CBJ38455
LinkDB
All DBs
Position
2349323..2350453
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AA seq
376 aa
AA seq
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MPRQKAATSANPADETIGAVDGPNAPNGRSGRRARAAAPAASEDIEVVDPLVDEVPAAER
ADVADTSDANDSADEEDEDEESEEAAPEEDFRTVLQAELAADTVQHYLNRISIKPLLTPA
EELHFSTLAKAGEFPARQVMIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKF
DPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKSGIDGRD
ASIEDIAHLLGKTTDEVQDVLSLNEHTTSLDTPFDLDPGTSLLDFLSDEHGASPDQEVAH
RELSQLMKSWLARLSDKHRYVVERRFGLNHIEPATLEELAAEMGLTRERVRQIQQEALVK
LKRHFASQGVRKDAVL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccagaaagccgccacgtccgctaatcccgccgatgagaccatcggcgccgtc
gatggcccgaatgccccaaacgggcgtagcgggcggcgtgcgcgcgccgcagcgccggca
gcctccgaggacatcgaagtcgtcgatcccctggtcgatgaggtgcccgccgccgagcgc
gccgacgtcgccgatacctcggacgccaacgacagcgccgacgaagaggacgaggacgag
gagagcgaggaagccgcacccgaggaagacttccgcacggtgttgcaggccgagctggcc
gccgacaccgtccagcactacctgaaccgcatcagcatcaagccgctgctgacgccggcg
gaggagttgcacttctccacgctggccaaggcaggagagttccccgcgcggcaggtgatg
atcgagcgcaacctgcgcctggtggtcagtatcgccaagggctatctgaaccgcggcgtg
ccgctgctggacctgatcgaagagggcaacctggggctgatgcacgcgatcgagaaattc
gatccggagcgcggcttccgtttctccacgtatgccacgtggtggatccgccagagcatc
gagcgggccatcatgaaccaggcgcgcaccgtccgcctgccggtgcacgtgatccgcgag
ctcaaccaggtgctgcgcgccaagcgccatctggaaaagagcggcatcgatggccgcgac
gccagcatcgaagacattgcgcacctgctcggcaagaccaccgatgaggtgcaggacgtg
ctctcgctcaacgagcacaccacctcgctcgatacgccgttcgacctggatccgggcacc
agcctgctcgatttcctgtcggacgagcatggcgcctcgccggaccaggaagtcgcgcat
cgcgagttgtcgcaactgatgaaatcctggctggcacggctgtccgacaagcatcgctac
gtggtggagcgccggttcggcctcaaccacatcgaaccggccaccctcgaagagctggcc
gccgagatgggcctgacgcgcgagcgtgtgcgtcagattcagcaggaagcgctggtcaag
ctcaagcggcacttcgcctcgcaaggcgtgcgcaaggatgcggtgctgtaa
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