Ralstonia solanacearum CMR15: CMR15_20477
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Entry
CMR15_20477 CDS
T02725
Symbol
lpdA
Name
(GenBank) Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm00010
Glycolysis / Gluconeogenesis
rsm00020
Citrate cycle (TCA cycle)
rsm00260
Glycine, serine and threonine metabolism
rsm00280
Valine, leucine and isoleucine degradation
rsm00310
Lysine degradation
rsm00380
Tryptophan metabolism
rsm00620
Pyruvate metabolism
rsm00630
Glyoxylate and dicarboxylate metabolism
rsm00640
Propanoate metabolism
rsm00670
One carbon pool by folate
rsm00785
Lipoic acid metabolism
rsm01100
Metabolic pathways
rsm01110
Biosynthesis of secondary metabolites
rsm01120
Microbial metabolism in diverse environments
rsm01200
Carbon metabolism
rsm01210
2-Oxocarboxylic acid metabolism
rsm01240
Biosynthesis of cofactors
Module
rsm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsm_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rsm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rsm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CMR15_20477 (lpdA)
00020 Citrate cycle (TCA cycle)
CMR15_20477 (lpdA)
00620 Pyruvate metabolism
CMR15_20477 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CMR15_20477 (lpdA)
00640 Propanoate metabolism
CMR15_20477 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CMR15_20477 (lpdA)
00280 Valine, leucine and isoleucine degradation
CMR15_20477 (lpdA)
00310 Lysine degradation
CMR15_20477 (lpdA)
00380 Tryptophan metabolism
CMR15_20477 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CMR15_20477 (lpdA)
00670 One carbon pool by folate
CMR15_20477 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsm04147
]
CMR15_20477 (lpdA)
Enzymes [BR:
rsm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CMR15_20477 (lpdA)
Exosome [BR:
rsm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CMR15_20477 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
HI0933_like
AlaDh_PNT_C
FAD_binding_2
Pyr_redox_3
3HCDH_N
FAD_oxidored
NAD_binding_8
FAD_binding_3
2-Hacid_dh_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
CBJ38520
LinkDB
All DBs
Position
2426930..2428366
Genome browser
AA seq
478 aa
AA seq
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MSKQFDVLVIGAGPGGYIAAIRAGQLGLNVACCEDNAYDDPKGEPRLGGTCLNVGCIPSK
ALLASSEEFENVNHHLADHGITVEGARVDVAKMLKRKDDIVGKMTKGIEFLFRKNKVTLL
KGHGKFVGKTDAGYQVEIAGKAGTEVVTAKHVIIATGSKARHLPGVPVDNVTIADNEGAL
KFGEVPKKLGVIGAGVIGLELGSVWRRLGSEVTILEALPSFLGAADESVAKEANKLLNKQ
GLKINVGVKVGEIESSGKGVKVNYTDAAGAAQVLECDKLIVSIGRVPNTDNLGLDAIGLA
ADPRGFIEVDDHCATKLPNLWAIGDVVRGPMLAHKAEDEGVAVAERIVGQKPHIDYNCIP
WVIYTFPEIAWVGKTEQQLKAEGREIKAGQFPFMANGRALGMGASDGFVKVIADAKTDEI
LGVHIVAANASDLVAEAVVAMEFKAAAEDIGRICHPHPSMSEVMREAALAVDKRQLNM
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaatttgacgtgctggtgatcggcgccggccccggcggctacattgccgcg
atccgcgccggccagctgggcctgaacgtggcctgctgcgaagacaatgcctacgacgat
ccgaagggcgagccgcgcctgggcggcacctgcctgaacgtcggctgcattccgtccaag
gcgctgctggcctcgtcggaagagttcgagaacgtgaaccaccacctggccgaccacggc
atcacggtggagggcgcccgcgtcgatgtcgccaagatgctcaagcgcaaggacgacatc
gtcggcaagatgaccaagggcatcgagttcctgttccgcaagaacaaggtgacgctgctc
aagggccacggcaagttcgtcggcaagaccgacgccggctaccaggtcgagatcgcgggc
aaggccggcacggaagtcgtgaccgccaagcacgtgatcatcgccaccggctcgaaggcc
cgccacctgccgggcgtgccggtcgacaacgtgaccatcgccgacaacgaaggcgcgctg
aagtttggcgaagtgccgaagaagctgggcgtgatcggcgccggcgtgatcggcctggag
ctgggctcggtgtggcgtcgcctgggttcggaagtgacgattctcgaagcactgccgagc
ttcctcggcgcggctgacgagtcggtcgccaaggaagccaacaagctgctgaacaagcag
ggtctgaagatcaacgtcggcgtgaaggtcggcgagatcgaatcgtcgggcaagggcgtg
aaggtgaactacaccgacgctgccggcgctgcgcaagtgctggagtgcgacaagctgatc
gtctcgatcggccgcgtgccgaacaccgacaacctgggcctggacgcgatcggcctggcg
gcggacccgcgcggcttcatcgaggtggacgaccactgcgcgaccaagctgccgaacctg
tgggcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggccgaagacgaaggc
gtggccgtggccgagcgcatcgtcggccagaagccgcacatcgactacaactgcattccg
tgggtgatctacaccttcccggaaatcgcctgggtcggcaagaccgagcagcagctcaag
gccgagggccgcgagatcaaggcgggccagttcccgttcatggccaacggccgtgcgctg
ggcatgggcgcgtccgacggcttcgtcaaggtgatcgccgacgccaagaccgacgagatc
ctgggcgtgcacatcgttgccgccaatgcatcggatctggtggcggaagccgtggtggcg
atggagttcaaggccgcggcggaagatatcggccgcatctgccatccgcacccgtcgatg
tccgaagtgatgcgcgaggccgcgctggctgtcgacaagcgtcagctgaatatgtaa
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