Ralstonia solanacearum CMR15: CMR15_mp10092
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Entry
CMR15_mp10092 CDS
T02725
Name
(GenBank) putative propionate catabolism operon regulatory transcription regulator (prpR)
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsm03000
]
CMR15_mp10092
Transcription factors [BR:
rsm03000
]
Prokaryotic type
Helix-turn-helix
Other families
CMR15_mp10092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
PAS
AAA_2
PAS_8
HTH_50
AAA_16
AAA_7
HTH_Tnp_ISL3
AAA
Oxidored_nitro
DUF134
PAS_7
HTH_23
TIP49
Diguanyl_cycl_sensor
DUF6262
Motif
Other DBs
NCBI-ProteinID:
CBJ39749
LinkDB
All DBs
Position
CMR15_mp:96478..98463
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AA seq
661 aa
AA seq
DB search
MAGPVSPTGRPAMSTAPHLAFRPRIWACGISRLSDLFLDIAAEYNDRAELRVITRGFEDI
VREIEAAGAERPDVVVAGGSNGAYLKPRLPLPVVVINPTGFDVMHALARARREAESVALV
THGDTPDEVRRFVAAYGMDVVFAAYQSRQDAESCVLDLRDRGVGAVVGPGLVTDLAAQAG
LQAVFLYSRDSVRAAFDTALEVVQATRREGQRRQRLDNLLQHLRDGVVALDAQGRVEAIN
QRLATALGIDARQAAGQPLLAIAPNLLGLLPDTDGDTLGTVRGVSYVIHRGPLASTGAGA
ADGTVFTFQESRAVERLDRTLRSGQRAPQFTARYRIDDLIGASAPMERVRALVRRYARSD
ATVLVLGESGTGKEMVAQGMHQLSARRDFPFVAINCGAFPEALLESELFGYEEGAFTGAR
KGGKTGLIEAAHRGTLFLDEIGEMPLPLQSRLLRVLQEREVVRLGSTEPTRVDIRVVAAT
HRALTDAVEAGTFRADLYYRLNILSIALPPLRDRPGDVLPLAAELLVQAARREPRLLLRI
PDTEVAARVLAGVADPLRRYPWAGNVRELQSVIERIAVELADTDAMDAGAITQDVLRVIA
PEVFEARGPGKKAALSLREHSRGVEAEAIRAALAAHDGDRDAVCKALGISKTTLWRRLNA
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccggacccgtttccccgaccggccgccccgccatgagcactgccccccacctcgcg
ttccgcccccgcatctgggcttgcggcatcagccgcctgagcgacctgttcctcgacatc
gccgccgaatacaacgaccgcgccgagctgcgcgtcatcacgcgcggcttcgaagacatc
gtccgcgagatcgaggccgccggcgccgagcgcccggacgtggtggtcgcgggcggctcc
aacggcgcttatctcaagccgcgcttgccgctgcccgtggtcgtcatcaacccgaccggc
ttcgatgtgatgcatgcgctggcccgcgcgcgccgcgaggcggaatcggtcgccctcgtc
acccacggcgacacgcccgacgaggtgcgccgcttcgtcgccgcgtacggcatggatgtg
gtgttcgccgcgtaccagtccaggcaggacgccgagagctgcgtgctggacctgcgcgac
cgcggcgtgggcgcggtggtcggccccggcctggtgacggacctggccgcgcaggccggc
ctgcaggcggtgttcctgtattcgcgcgattccgtgcgcgccgccttcgacaccgcgctg
gaagtggtgcaggccacccgccgcgaaggccagcgccgccagcgcttggacaacctgctg
cagcatctgcgcgacggcgtggtcgcgctcgatgcccagggccgggtcgaggccatcaac
cagcggctggccaccgcgctcggcatcgacgccaggcaggccgccgggcagccgctgctc
gccatcgcgcccaacctgctgggcctgctgcctgataccgacggcgacacgctcggcacc
gtgcgcggtgtgagctacgtcatccatcgcggcccgctggccagcaccggtgccggcgcg
gccgacggcaccgtgttcacctttcaggaatcgcgcgcggtggagcggctcgatcgcacg
ctgcgctccggccagcgcgccccgcagttcaccgcccgctaccggatcgacgacctgatc
ggcgcatccgccccgatggagcgcgtgcgcgcgctggtgcggcgctatgcccggtccgat
gcgaccgtgctggtgctgggcgaatccggcacgggcaaggagatggtggcgcagggcatg
catcagctgagcgcacggcgcgactttccgttcgtcgctatcaactgcggcgcctttccg
gaggcgctgctcgagagcgagctgttcggctacgaagagggcgccttcacgggcgcgcgc
aagggcggcaagaccgggctgatcgaggccgcgcatcgcggcacactgttcctcgacgag
atcggcgagatgccgctgccgctgcagagccgtctgctgcgcgtgctgcaggagcgcgag
gtggtgcggctcgggtccaccgagccgacgcgcgtggacatccgcgtggtcgccgccacg
caccgcgcgctgacggatgccgtggaggccggcaccttccgcgctgatctgtactaccgc
ctcaacatcctcagcatcgcgctgccgccgctgcgcgaccggcccggcgacgtgctgccg
ctggcggctgagctgctggtgcaggccgcgcgccgcgagccgcgcctgctgctgcgcatt
cccgacacggaggttgccgcccgcgtgctggccggcgttgccgatccgctgcggcgctat
ccatgggccggcaacgtgcgcgagctgcagagcgtgatcgagcggatcgcggtggaactg
gccgacaccgacgccatggacgccggtgccatcacgcaagacgtgctgcgggtgatcgcg
cccgaggtgttcgaggcgcggggaccggggaaaaaagccgcgctgagtttgcgcgagcac
agccggggcgtggaagcggaggcgatacgcgccgcgctggcggcgcacgacggcgaccgc
gatgccgtgtgcaaggcgctggggatcagcaagacgacgttgtggcggcggttgaacgca
ggatag
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