Ralstonia solanacearum CMR15: CMR15_mp10856
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Entry
CMR15_mp10856 CDS
T02725
Symbol
popC
Name
(GenBank) leucine-rich repeat protein type III effector protein
Organism
rsm
Ralstonia solanacearum CMR15
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_1
LRR_9
Motif
Other DBs
NCBI-ProteinID:
CBJ40503
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All DBs
Position
CMR15_mp:complement(997476..999740)
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AA seq
754 aa
AA seq
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MMSNFRQRGLDGVATQARVHSDLKRAADYMKRLQQGGGKELVLTSLPIARLPDAVFNMTQ
LKAIRTDHCDLRELSPALQNLRQLETLSLSGAGKLNALPHAVGQLPRLQELRLVDTGIQA
LPPMGGASALKEITVSNAPLAALPDDLGALRKLAHLSLSGTQLRELPASTGYLSALQTLS
LRDNKKLSGLPPSLSNLSGLESLTLAGNHIRELPSMSKAHALQELTVDEPSLAKLPPDFG
AGGTLGKLAHLSLSNTKLRELPANLGNLSGLKTLTLQGNQKLEALPPSFGQLTGLEMLSL
VGNHIKSLPPMSGVSALKKLKIDDASLASLPRDFGAQHKALTNLSLSNTQLSTLPSSIEK
LSHLQELKLNDNTQLRTLPDSLTKMKRLQKLDLSGCKRLESLPQSIGKISTLQELDLLNC
TRLTIAALPYSVRFPRDGLRVRLPDHLKAEVYGERLKANPRAQVLLGDLERKGEQMDDAI
FDSRPQLNEGEVISLAYHLKNANDRKPLVQQNAERKGARSAESDSILMRQALANLFNVST
DAGEFERLQNAALSLPAILQRELADLMTAREGQQLVRSIGEAAYGVRANPALQKELATLG
QQIASDPVIREVRLRHSRSHLAEKLTPLVEPLWENARALAPMPSDLRKQLTSLLAVEPGR
KLVSEISKEVYSKKHRDEILQDLMPTLAARIETDPQSQAAQRQLNRELPGLSQQAQKDTY
AMAMTEIVRDHWNGVQAEAKKQGKAPMAGPSGQH
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaattttcgccaacggggcctcgacggcgtcgcgactcaggcgcgcgtgcac
agcgacctcaaacgcgcggccgactacatgaaaagactgcagcaggggggcggcaaagag
ctggtgctgacatcgctccccatcgccaggctgcctgatgccgttttcaacatgacccag
ttgaaggcgatccgcacggatcattgcgatctgcgcgaattgtcgccggcgctccagaat
ctgcgccaactggaaaccctgtctctgagtggcgccggcaaactcaatgcgctgccccac
gcagtcgggcaattgcctcgcctgcaagagttgaggctggtcgacacaggcatccaagcc
ctgccgcccatggggggggcctccgcgttgaaggagatcacggtgagcaacgcaccgctc
gcagcgctgccggacgatcttggcgcgctgcgcaaactggcccacctgtccctgtccggc
acgcagctgcgcgagttgcctgccagcaccggatacctgtcggcgctgcagaccctatcg
ctgcgtgacaacaaaaaactgagcgggctgcccccatcgctgagcaacctgtccggcctg
gaatccctgacgctggcaggtaaccacatccgcgaactgccctcgatgagcaaagcgcat
gccctgcaggagctcacggtggacgagccttcgcttgcgaagctccccccagacttcggc
gccggcggcacgcttggcaagcttgcccatctgtcgctttcgaatacgaagctgcgcgaa
ctgcctgccaacctcgggaacctgtcggggctgaagacgcttaccctgcagggcaaccag
aagctggaggccctgccgccatcgttcgggcagttgaccggcctggagatgttgagcctc
gtcggcaaccacatcaagagcctgcctccgatgagcggtgtgtcggcgctgaagaagctc
aagatcgacgatgcctcgctggcatcgctgccgcgagacttcggcgctcagcacaaagcg
ctgacgaatctgtcgctctcgaacacgcagctgagcaccttgccgtccagcatcgaaaag
ctgtcgcatctgcaagagctcaagctgaacgacaacacccagctcaggacattgcccgat
tcgctcacgaagatgaaacggctgcaaaaactggatctatccggttgcaagcggcttgaa
tcgctgccgcaatcgatcggcaagatatccaccctgcaagagcttgatctgctcaactgc
acgcgcctgaccatcgcggcgctgccgtattccgtgcggtttcctcgtgacggactgcgc
gtccgcttgccggatcacctcaaagcggaggtttacggggagcgcttgaaggcgaacccc
cgtgcccaagtgctgctcggcgatctggagcgaaaaggcgagcagatggacgacgcgata
tttgactcgcggccacagctcaatgaaggcgaagtgatctcgctggcttatcacctcaag
aatgcaaacgatcgcaaaccgctcgtccagcagaatgcggaacgcaaaggcgcacggtcg
gcagaaagcgactcgatactgatgcggcaggcgctggccaacttgttcaacgtttccacg
gatgccggcgaattcgagcggttacagaacgccgccctctccctccccgccatcctgcag
cgtgaattggccgacttgatgactgcgcgggaggggcagcaactggtccggtcgatcggg
gaagccgcctatggcgtgcgggcgaacccagccctgcaaaaggaattggccacgctgggg
cagcagattgcctcggatccggtgattcgggaggtgcggctgcggcacagccgctcgcat
ctcgcggagaaattgacgcccctggtcgaaccgctctgggagaacgcgcgcgcattggcg
ccgatgccctcggacctgcgcaaacagctgaccagtttgcttgcagtcgagccaggacgg
aaactggtcagcgagatcagcaaggaggtctatagcaagaaacatcgtgatgagatcctg
caagacctgatgccgaccctggcggcacggattgaaacggacccacagagccaagcggcg
cagcggcagctgaaccgcgaactccccgggctctcgcagcaggcacagaaggacacgtac
gcgatggccatgacagagatcgttcgggatcattggaatggcgtgcaggcggaagcgaaa
aaacaaggcaaggcgcccatggccgggccgtcgggccagcactga
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