Ralstonia solanacearum CMR15: CMR15_mp20009
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Entry
CMR15_mp20009 CDS
T02725
Name
(GenBank) Hemolysin; Filamentous haemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rsm00536
]
CMR15_mp20009
Glycosaminoglycan binding proteins [BR:
rsm00536
]
Heparan sulfate / Heparin
Microbial pathogens
CMR15_mp20009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
DUF6862
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
CBJ40585
LinkDB
All DBs
Position
CMR15_mp:complement(1083117..1091597)
Genome browser
AA seq
2826 aa
AA seq
DB search
MRQPVTARARAALAQPRAIALQQEQHGASAGTADPVSRHDRARRSFVARSIAATVALISW
LGPVQISWQAARQSAATIALHGTTVDSPFTSWHTTGRLLVRWGLRQAQAGAITDPTAPIR
FTPTLTQTTGQGGGVPVVNVTTPNPSGLSYNLLRSLTVDGIGLILNNSLTGGGTLLGGNV
GGNANLATSGPASTILTQVTGTDPIRINGTVEVFGAPASVIFAAPAGIYTQGAGFTNTPR
VTLSTGTPQFLNGSGANVSFDQATAVGFLVNSGRVQIDPAAGSTAGAGIEGTVGAINLIG
QTVGINAPLYAGNQISVIAGNQQVAPVATGTGRAGSDWQVSGAGANAAANSASAQNGLAI
DATAFGAMTAGQIKLISTAQGLGVRAAGDLAANTSNVNIDANGDVSVGNVYGQQAVGIAT
TGAVTTSGTVRAQQDVTIGAGGDLTIGGAAQAGNNLTLNADGNVAGAGNLAAAKALTVIA
GKSVNLGGNLNAANIAVTALGTDGTGDLALGGNVSSPNTIQLNAARDASIAGPLTTGGDL
RLTAGRDIAIGGTVQSTGASVLGAARDLHVAGTGSVTAGATTTATAGRNLGVDGIVSSRG
DVRLDATDGQVAATGSLISGGAITAAAGGANGDIALGGKVSAPGSVTLTAARNATVGGQL
VTGTDLKIGAKQDVAVTGAVQSVGATALTGGRDIGIATTGAVTAGTTTTAAAGRHLLLLG
STASGGDTQLTATGVLATAGTVLAGGNVSASGQGGVALGGTVYATRGVTAQSGGGAIGVT
GSVIAHGGSAVLTGTDVSVSGTTQSSGDTALTATQGSVAVDGQSASVGNLNISATQDIAG
QGTTTSVGNTTLAAGRDIARTGGSQAAGNLTATAGNRLAMAALPVVGGDATLSGASVVLG
ATGKSSQIKGTLTATGAQGVTTAGTINAGSAKLTGGAVNNIGTVTASNTLAVNGSTITNS
GTLGGATTSVHGTDVANAGLIGGQTVSVTADNTLSNQNGTLLGTKSLAVAANTLTSNRNG
VMFAGSPSGTTPGQGDLSATVSGGNGSFNNAGGQILASNNATINLRNQTVDGASLGTINA
NGALTYNVGAVANTGAWTVGGKTATINAANGIANTGSIQHAGDLTLSTPGAVTNSGQIIA
GNDLAVSGGGISNAAGATLHADHDLSVTGATTNRGTVEALNDVRIAGAGYDNAGALTQAN
RDINVNVSGNVLNQGGTIGAGRDVNLTAGQIVNDATVSGGASTTVVTGQEVNPTYLSKIV
IGREQLSFSLPGGEQGSPDYMAIYRAVTIGDLKPDANGVIYGYLATELVRSLHDQYVDFW
HLGSMVDHPATVLATLPTVTRTETTTQAGVSGIIRAGRNLAVTASTLSNNGGQISAAGNI
TMAVGTLNNGAAAGATKTITESIDGAVLNSFMAQLYDALHSGTKPLFSDAVMSDGCSDGC
PTPHWFVMQNQVVPGTFHTVPAATPPAPQVTVQQTAGKQGVIAAGGSIDLTQVGTLNNGG
QIAAAGNISLGGSVNNVGQQLVNRTTLPGCVGNPATCTNAVGNSFSGTSAGPWDSPTYDV
IDPKQQVASIVAGGTLTANAAQLTNQTGTITAAGNVLITAPTVTNTGGTIQSKAGSVTIN
SANGLVNQAAPTTAVHQSHGSDVAPCGKSGSGNCDTATQTATGDAGMILAAGDLTINAGS
VRNNGGAIVAGGNNTITTGSFDNSSVFLRQYYHWMFLDQDSNASDRWGCDSAGDISGCQR
AFGGNLRNGTNANAENAPTIGVLNSYVSGGNLTIRAGGAIVNSGNIAGTAISLSGATITN
GITNPSIQTPPSTSGRQVISLGPIGTPNAQLPVTGTPDTFSGPTTVLQQGVPTPSNPGTT
NGRWQFNPVVVTTQSGGAVAWHFNAPPAGAAVSAPAASGSTAQYLSNSPATAVLGGVGPQ
TLINALPAELRPGGTPFYYDPQAENQRLDQAALAQTGRTSFINGLTYDSQTHLTADDQQK
LILYQNAVDYAKAHNVQLGQALTPGQLAALDKPMLWYVTQQVPDPNCLSSACPMVSALVP
QVYLPQGYSGIEPGGSIVASKSLELLADNPIRNTGTLGSYGTLTTNTTIVNEQRAAEMTA
AWQPIEDGWARTTGQQGQANSGFVFAANAADIAGQIRNINGVVAQLNADGSMSAAEAARV
AAAVQAGMQAVTSTHTDTFVRSESWFGQLFAGVVMVAIGIMTGGAAMAAYAGVGATLTVG
QAMAQAAVASMTTNTMQQASSGQGFSFGALVKAGATSALTAGTTQGITLNANGTLGTVDS
LNSVASDRSLAALSGAKNVGNGLTQAAASSGTLGEQLTALTLGIGIKAGVTTAINGGSFG
RALTNTAASDIGAVAANVLGTLSPGIGEVNASPNSVVGNILGHVALGCATSSMQGTGCAG
GAAGGLAGSVVAPLVGMGLYAGTSGTNSAIDAATVAIGAMAGGAIAHAIGGDTTAGASTA
QNAAMNNWLEHRRPNPMVYSEQERRDNAAAACKQHPEQCDVANGWDAVSKQRDANLQAAC
ANLSSDTCRDAIAVAKAAGNYIVFAGGKVYAYGPETPVARSLDPSPAAKTLDTMVGSPLA
GVFGGIPYFKSNADPAAGYYFAQYGMALEGIGAGVLGLPTGPLAGPGWRAALESPNTLYV
GAGVGSAFPTWTNVAGPYSVVGQGGGAATTVRAGQGYSIGDVLRGGTTNVSPALSTAADS
STAASSRNGVYIPQDANGNPVPLPQRTVAGIGDVPLPLPTTEGAPHTVLGGKVASDGETV
YRQSATFPGGTWPSLGGVDVPWGRVDWSDHGYLPGPPHPAPHIHEFYYEPVQKQWQISPA
KPFFGH
NT seq
8481 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagccggtcacggcccgcgcacgcgctgcgttggcgcagccgcgtgccattgca
ctgcaacaagaacaacacggcgctagcgcagggactgctgatcccgtcagccgccacgac
cgcgccaggcgctcgttcgtggcacggtccatcgccgccaccgttgcgctcatcagctgg
ctcggcccggtgcagatctcctggcaagccgcccggcagagcgccgccacgattgcactg
cacggcacaaccgtcgacagcccattcacgtcgtggcacaccaccggccgcctgctggtg
cgctggggcctgcggcaagcgcaggccggcgccatcaccgatcccaccgcgccgatccgc
ttcacgcccaccctcacgcagaccacggggcagggcgggggcgtaccggttgtgaacgtc
acgacgccgaacccgagcggcctgtcgtacaacctgctgcgctcgctgacggtcgatggc
atcggcctgatcctgaacaacagcctgaccggcggcggcacgctcctgggcggcaacgtt
ggcggcaacgccaacctggccacgtccggcccggcctcgacgatcctgacgcaggtcacg
ggcaccgatccgatccgcatcaacggcacggtggaggtgttcggcgcgccggccagcgtg
atctttgccgcgccagcgggcatctatacgcagggcgcggggtttacgaacacgccacgg
gtgacgctgtccaccggcacgccgcagtttctgaacggcagcggcgcaaacgtttcattc
gatcaggccaccgcggtgggcttcctggtcaacagcgggcgcgttcagatcgatccggcg
gcgggctccacggccggtgccgggatcgagggcacggtcggggcgatcaacctgatcggc
cagacggtgggcatcaatgcgccgctgtacgcaggcaaccagatcagcgtgatcgcgggg
aaccagcaggtcgcgccggtggcgacgggcacgggccgggcgggttccgactggcaggtg
agcggcgcgggcgccaatgcggcagccaacagcgcgagcgcgcagaacggcctggccatc
gacgcgacggcgttcggcgcgatgacggcggggcagatcaagctgatctcgacggcgcag
gggttgggcgtgcgggcggcgggcgacctggcggccaataccagcaacgtcaatatcgat
gccaatggcgatgtcagcgtcggcaacgtgtatgggcagcaggcggttggtattgccacc
acgggggccgtgacgacgagcggcaccgtgcgggcgcagcaggacgtgacgatcggggcg
ggcggtgacctgacgattggcggtgcggcgcaggcggggaacaacctgacgctgaacgcg
gacggcaatgttgcgggcgcgggcaacttggctgcggccaaggcgctgaccgtgatcgcg
ggcaagagcgtcaacctgggcggcaacctgaatgcggccaacattgccgtgacggcgctg
ggtacggacggtacgggtgatctcgcattgggcgggaacgtgtcctctccgaacaccatc
cagctgaacgcggcgcgcgacgcttccattgccggtccgctgaccacgggcggcgatctg
cgattgacggccggccgcgatatcgcgatcggcggtacggtgcagagcacgggggcatcg
gtactcggcgcggcccgcgatctccatgtcgccggtaccggttctgtcacggcaggcgct
acgacgacagcgacggctggccgcaacctgggcgtggacgggatcgtctcctctcgcggc
gatgtccggctcgatgccacggacggtcaggtggccgccacggggtcgctcatctccggt
ggtgccatcaccgctgcggccggcggtgccaatggagacatcgccctgggcggcaaggtc
tcggcgcccggttccgtgacgctgaccgctgcgcgcaatgcgacggtcggcgggcagctc
gtgaccgggaccgacctgaagatcggggccaagcaggatgttgccgtcacgggggcggtc
cagagcgtgggcgctacggcgctcacgggtggccgggacatcggcatcgcgaccaccggc
gccgtcacggcggggaccacgacaacggcggccgccggccgtcatctcctcctcttgggc
agtacggcctcgggtggcgacacccagctgactgcgacgggggtgctggcaaccgcgggt
accgtgcttgcgggcggtaacgtcagtgcgagcgggcagggcggtgtcgccctgggcggc
acggtgtatgccacgcggggggtgacggcgcaatcgggcggcggagccattggcgtcacc
ggcagcgtcatcgctcacggtggtagcgccgtgttgaccgggacggatgtgtccgtctcc
ggcacgacgcagtccagtggggatacggcgctgaccgcgacgcagggaagcgtggccgtc
gacggtcaatccgcttcggtgggcaacctgaacatctcggccacgcaggacattgccggt
caaggcaccaccaccagcgtcggcaacacaacccttgcggcgggccgcgatattgcccgc
acggggggcagccaggcggcgggcaatctgaccgcgacggccgggaaccggcttgccatg
gcggcactgcctgtggtcggcggggatgccaccctgagcggggcgagcgtcgtgctggga
gccaccggcaagagcagccagatcaagggcacgcttaccgccaccggggcgcaaggtgtc
acgacggccggcacgatcaacgcggggtcggccaagctgaccggcggcgccgtcaacaat
atcggcaccgtcacggcgtcgaacacgttggccgtcaacggttccaccatcaccaacagc
ggcacgctgggcggagcgacgaccagcgtgcacggtacggatgtggccaatgccggcctg
atcggcggccagacggtcagcgtcacggcggacaacacgctcagcaaccagaacggcacg
ctgctcgggaccaagtcgctggccgtggccgccaacacgctgacgagcaaccgcaacggc
gtgatgttcgccggcagtccgtccggcaccacgcccgggcaaggcgacctgagcgccacg
gtgtccggcgggaacggcagcttcaacaacgccggtggccaaatcctggccagcaacaac
gccacgatcaacctgcggaaccagactgtcgacggcgcgagcctcggcaccatcaacgcc
aatggggcgctgacctacaacgttggcgctgtcgccaacaccggcgcatggaccgtgggc
ggcaagaccgcgaccatcaacgcggccaacggcatcgccaacactggctcgatccagcac
gcgggcgatttgacgctgagcacgcccggcgcggtcaccaacagcggacagatcatcgcc
ggcaacgatctggcggtgtcgggcggcggcatcagcaacgcggccggggcgacgctgcac
gccgatcatgacctgtctgtcaccggcgccaccaccaaccggggcacggtggaagcgctc
aatgacgtcaggattgccggggccggctatgacaacgccggcgcgctgacccaggccaac
cgcgacatcaacgtcaatgtgtcgggcaacgtcctgaaccagggcggcacgatcggtgcc
gggcgcgatgtgaacctgaccgccggccagatcgtcaatgatgcgacggtatcgggcggt
gccagtacgactgtggtgacggggcaggaggtcaacccgacgtacctgtcgaagattgtg
atcggcagggagcagctcagtttctcgctcccaggcggtgagcaaggcagcccggactac
atggcgatctaccgagcggtcacgatcggcgatctgaaaccggatgcgaacggagtcatc
tacggctatttggcgaccgaactggtccgcagtctgcatgaccagtacgtggacttctgg
cacctcggcagcatggtcgaccatcctgctacggtgcttgccacgctgccaaccgtgacg
cggaccgagacgacgacccaggctggtgtcagcggcattatccgggcgggtcgcaatctg
gcggtgacggcttctacgctgtccaacaacggggggcagatcagcgccgcgggcaatatc
acgatggccgttgggacgctcaacaatggcgcagcggcgggcgcgaccaagaccatcacc
gaatccatcgacggtgccgtgctcaatagcttcatggcgcagctctatgatgctctgcac
tccggcaccaaaccgttgttttctgatgcggttatgagcgatggttgctcggatggttgt
cccacaccgcattggtttgtcatgcagaaccaggtggtgcccggcacattccacaccgtg
ccggcagcgacccctcccgcaccgcaagtcaccgtgcagcagaccgctggcaagcagggc
gtcatcgctgccggcggtagcatcgatctgacgcaggttggcacgctgaacaacggcgga
cagattgccgctgccggcaacatcagcttgggcggttcggtcaacaatgtcggccaacaa
ctggtcaaccgcacgacgttgcccggttgcgtcgggaatcccgcaacgtgcaccaacgct
gtcggcaacagcttttctggcacttccgccggtccgtgggacagcccgacgtacgacgtc
atcgatcccaagcagcaagtcgccagcatcgtggcgggtggcacgctgacagccaacgcc
gcccagctgaccaatcagaccggcaccattaccgcggccgggaatgtcctgatcacggcg
cccaccgtcaccaacacgggcgggacgatccaatcgaaggccggttcggtcacgatcaat
tccgccaatggcctggtcaaccaggccgcaccgacgaccgcggttcaccagagccacggc
tcggatgtcgcgccatgcggcaagagcggcagcggcaactgcgatacggccacgcaaacc
gccaccggtgacgccggcatgatcctcgccgcgggcgacctgactatcaacgccggttcg
gtgcgcaacaacggcggcgccatcgtggccggcggcaacaacaccatcaccacgggcagc
ttcgacaacagctcggtcttcctgcgccagtactaccactggatgttcctggaccaggac
agcaacgcgagcgatcgctggggctgcgactccgcaggcgacatctccggttgccagcgg
gcctttggcggcaaccttcgcaatggcaccaatgccaacgccgagaacgcccccaccatc
ggcgtgctgaactcgtacgtgagcggcggcaacctgaccatccgcgcgggcggcgccatc
gtcaacagcggcaacatcgccggcacggcgatttcgctgtcgggcgcgacgatcaccaac
ggcatcaccaacccgtcgatccagacgccgccgtccaccagcgggcggcaggtgatcagc
ctgggcccgatcggcacgcccaatgcccagttgccggtgaccggcacgccggacaccttc
agcggcccgaccaccgtgctgcagcagggtgtgccgactccgtccaatccgggcaccacg
aatgggcggtggcagttcaaccccgtcgtcgtgacgacccagagcggcggcgcggtggca
tggcatttcaatgcgccgcccgccggcgcggcggtgagcgcgccggcggcgtccggctcc
acggcgcaatacctgtcgaacagccccgccacggccgtgctgggcggcgtcggcccacag
acgctgatcaacgcactgccggccgagctgcgccccggcggcacgccgttctactacgac
ccgcaggccgagaaccagcggctggaccaggccgcgctggcccagaccggccgcaccagc
ttcatcaacggcctgacctacgacagccagacccacctgacggcggacgatcagcagaag
ctgatcctgtaccagaacgccgtcgactacgcgaaggcgcacaacgttcagctgggccag
gcgctgacgccgggccaactggccgcgctggacaagccgatgctgtggtacgtgacgcag
caggtgccggatccgaactgcctgagcagcgcgtgcccgatggtcagcgcgctggtgccg
caggtgtacctgccgcagggctacagcggcatcgagccgggcggcagcatcgtcgcgagc
aagtcgctggagctgctggcggacaacccgatccgcaacacgggcacgctgggctcgtac
ggcacgctgaccaccaacaccaccatcgtcaacgagcagcgcgcggcggagatgacggcg
gcgtggcagccgatcgaggacggctgggcgcgcacgacggggcagcaggggcaggccaac
agcggcttcgtgttcgcggccaatgcggcggacattgcggggcagatccggaacatcaac
ggtgtcgttgcgcagttgaatgcggacggctcgatgagtgcggcggaggctgcgcgggtg
gcggcggccgtgcaggcgggtatgcaggcggtcacgagcacgcacaccgatacctttgtg
cggtcggagagttggttcgggcaactgttcgccggcgtggtgatggtggccattgggatc
atgacgggcggcgcggcgatggccgcgtatgccggggtgggagcgaccctgacagtgggt
caagccatggcccaggcggcggttgcgtcgatgacgaccaacacgatgcaacaggcgagc
agcggccagggcttcagcttcggcgcgctggtcaaggcaggcgccacgtcggcgctgacg
gcggggactacgcaggggatcacgctcaatgcgaatggcacgcttgggacggtcgatagc
ctgaactcggtggcatccgatcggagccttgcggcgttgtcgggtgccaagaacgtcggc
aacggtctgacgcaggcggcggcttcaagcggcacgctgggcgagcaattgaccgcgctg
acgttgggcatcggcatcaaggccggtgtgaccacggccatcaacggcggcagctttggc
cgggcattgaccaataccgccgccagtgacattggggcggtcgcggccaacgtactcggc
acgttgagtccggggatcggcgaagtcaatgcctcgccgaacagtgtcgtcggcaacatc
ctcgggcacgttgcgctgggctgtgcgacttcgtcgatgcaggggacgggttgcgcgggc
ggcgcagcgggcggtctggcgggatcggtggtggcgccgctggtgggcatgggcctctat
gcgggcacgtcgggcacgaacagtgccatcgatgcggcgacggtggcgattggcgcgatg
gcgggcggggcaattgcgcatgcgatcggcggcgacaccacggccggggcttcgacggcg
cagaacgcggccatgaacaactggctggagcaccgtcggcccaacccgatggtctactcg
gagcaggagcgtcgggataacgcagcggcggcttgcaaacagcacccagagcagtgcgat
gttgccaatggctgggatgccgtgtcgaagcagcgtgatgccaatttgcaggccgcgtgc
gccaacctgagttctgacacatgtcgcgatgcgatagcggtggcgaaggcggcgggcaac
tacatcgtctttgccggcggcaaggtctacgcgtatggtccggagacgcccgtcgctcgt
tcgttggaccccagtccggcggcgaagacgctggacacgatggtgggaagtccgctggca
ggggtatttgggggcattccgtatttcaagtccaatgcggacccggctgccggttactac
ttcgctcagtacgggatggcgctggaagggatcggcgcgggggtgctgggtctgccgacg
gggccgttggctgggccggggtggcgggcggcgttggagtcgccgaatacgctttatgtt
ggggcgggggtgggtagtgccttcccgacctggaccaatgtggcggggccgtattctgtt
gttggtcagggtggcggggcggctacgacggttcgagctgggcagggatattcaattggt
gatgttctgcggggagggacaacaaatgtctcgcccgcactctctactgccgctgattca
tctaccgcagcgtcgtcacgtaacggcgtttacattcctcaggatgcgaacggcaacccg
gttccgttgccgcagcgtactgttgccggaattggggatgtgcctcttccgctaccgaca
acagaaggggcgccacacacagttttgggtggaaaagtggcaagcgatggggaaacggtc
tatcggcaatcagcaacgttcccaggtggtacttggccgtctctggggggtgtcgatgtg
ccatggggacgcgttgactggagtgaccacggatatctccctggcccgccgcacccggcc
ccacacattcatgagttttactatgagcctgtgcagaagcagtggcaaattagtcctgcg
aagccgttttttggacactaa
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