Ralstonia solanacearum CMR15: CMR15_mp20379
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Entry
CMR15_mp20379 CDS
T02725
Name
(GenBank) putative atp-dependent dna helicase II protein (uvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03420
Nucleotide excision repair
rsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMR15_mp20379
03430 Mismatch repair
CMR15_mp20379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_mp20379
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMR15_mp20379
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMR15_mp20379
MMR (mismatch excision repair)
Other MMR factors
CMR15_mp20379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CBJ40950
LinkDB
All DBs
Position
CMR15_mp:1540965..1543097
Genome browser
AA seq
710 aa
AA seq
DB search
MPAAIPTPETAPAPDYLAQLNDQQRLAVEFGISGPDAAQTGPLLVLAGAGSGKTHTLGWR
VAHLVANGADPQRILLLTFSRRAASELSSRAGHLLARALQGSAGARSAAGTAYRTALPWA
GTFHGIGARLLREYAERIGLAPDFTIHDRSDAADLLNVVRHELNLSTKERRFPLKQTCLA
IYSRAINAESPLDAVLKQHFPWCAMWQAQLRTLFDAYVEAKQAQHILDYDDLLLYWHAMV
ADADLAAEIGARFDHILVDEYQDTNRLQSSILRALRPDGRGLTVVGDDAQSIYAFRAATV
RNILDFPRHFTRPAHTVLLERNYRSTQPILEASNGVMRFATERFAKTLWTDRASTHRPRL
ISVRDEAEQARCVAEQVLRHREGGLALKSQAVLFRTASHSAPLEIELTRRNIPFVKYGGL
KFLEAAHVKDVLSVLRWAENPRNRIAGFRVIQLLPGAGPATAARVLDAMAEAADPVAALL
AHVPPARLAGDWAALMTLMATLRTPKDNAAWAGELEAVGAWYAPHMERLHDDAAVRQGDL
DQLARMAATYASRERFLTEMTLDPPELTSDESGEPYRDEDYLILSTIHSSKGQEWKAVYL
LNAVDGCMPADLGAGSHDELEEERRLLYVAMTRARDHLDILVPQRFYMTQQTPNGDRHLY
ASRTRFIPPALLPLFEACAWPPPEPGADPAAEARAAAKVDLAKKMRGYWR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgccatccccaccccggaaaccgcccccgcgcccgactacctggcgcaactg
aacgaccagcagcgcctggccgtcgagttcggcatttcggggccggacgcggcgcagacc
ggcccgctgctggtgctggcgggcgcgggctccggcaagacgcatacgctgggctggcgg
gtggcgcacctggtggccaatggcgccgatccgcagcgcatcctgctgctgacgttctcg
cgccgggcagcgagcgagctgtccagccgcgccggccacctgctggcgcgtgccctgcag
ggcagcgccggcgcgcggtcggccgccggcaccgcgtaccgaaccgcgctgccctgggcc
ggcaccttccacggcatcggcgcgcgcctgctgcgcgaatacgccgagcgcatcggcctc
gcgcccgatttcaccatccacgaccgcagcgacgcggccgacctgctcaatgtcgtgcgg
catgagctgaacctgtcgaccaaggaacgccgcttcccgctcaagcagacctgcctggcc
atctactcgcgcgccatcaatgccgagagcccgctggatgccgtgctcaagcagcacttc
ccgtggtgcgcgatgtggcaggcgcaactgcgcacgctgttcgacgcctacgtcgaggcc
aagcaggcccagcacatcctcgactacgacgacctgctgctgtactggcacgcgatggtg
gccgacgccgacctggccgccgagatcggcgcgcgcttcgaccacatcctcgtcgacgaa
taccaggacacgaaccggctgcagtcgtcgatcctgcgcgcgctgcggccggacgggcgc
ggcctgacggtggtcggcgacgatgcgcagtccatctacgccttccgcgcggcgacggtg
cgcaacatcctcgacttcccgcgccacttcacgcggccggcgcacacggtgctgctggag
cgcaattaccgctccacgcagccgatcctggaggcgtccaacggcgtgatgcgctttgcc
accgagcgcttcgccaagacgctgtggaccgaccgcgcatcgacccaccgcccgcgcctg
atctcggtgcgcgacgaggccgagcaggcgcgctgcgtggccgagcaggtgctgcggcat
cgcgagggcgggctggcgctgaagtcgcaggccgtgctgttccgcaccgccagccacagc
gcgccgctggagatcgagctcacccgccgcaacatccccttcgtcaaatacggcggactc
aaattcctggaggccgcgcacgtcaaggacgtgctgtcggtgctgcgctgggccgagaat
ccgcgcaaccgcatcgccggcttccgcgttatccagctgctgccgggcgccggccccgcc
accgccgcgcgcgtgctcgatgccatggccgaggcggccgacccggtcgccgcgctgctg
gcccatgtgccgccggcccgcctggccggcgactgggcggcgctgatgacgctgatggcc
acgctgcgcacaccgaaggacaacgcagcctgggccggtgagctggaggccgtcggcgcc
tggtacgccccccacatggagcgcctgcacgacgatgcggccgtccgccagggcgatctc
gaccagctcgcccgcatggccgcgacctatgcctcgcgcgagcgcttcctgaccgagatg
acgctcgacccgcccgagctgaccagcgacgaatccggcgagccgtaccgcgacgaggac
tacctgatcctgtcgaccatccactcctccaaggggcaggagtggaaggccgtctacctg
ctcaacgccgtggacggctgcatgcccgccgacctgggcgccggctcgcacgacgagctg
gaggaagagcgccggctgctctacgtggccatgacgcgcgcccgcgaccacctcgacatc
ctggtgccgcagcgcttctacatgacccagcagacgcccaacggcgaccgccacctctac
gcatcgcgcacgcgcttcattccgccggcgctgctgccgctgttcgaggcctgcgcctgg
ccgccgcccgaacccggtgccgacccggcggccgaggcgcgcgcggcggccaaggtcgac
ctggccaagaagatgcgcggctattggcggtaa
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