Ralstonia solanacearum CMR15: CMR15_mp30049
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Entry
CMR15_mp30049 CDS
T02725
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm02020
Two-component system
rsm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CMR15_mp30049 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CMR15_mp30049 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsm03021
]
CMR15_mp30049 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rsm02035
]
CMR15_mp30049 (fliA)
Transcription machinery [BR:
rsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMR15_mp30049 (fliA)
Bacterial motility proteins [BR:
rsm02035
]
Flagellar system
Flagellar assembly proteins
Stator
CMR15_mp30049 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
DUF3349
UPF0154
Motif
Other DBs
NCBI-ProteinID:
CBJ41053
LinkDB
All DBs
Position
CMR15_mp:complement(1659119..1659880)
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AA seq
253 aa
AA seq
DB search
MQDAPKAGMDMYTATGRKTKSDEMAAYAPLVRRIANQMMVKLPASVELDDLIQAGMMGLL
DALSRYEETQGVQFEFYAAQRIRGAILDELRGSDWLPRGLRRNARTIEQAIQKLQQQKGR
APTETEIAAFLNMSLADYQKLLVELQGSQLLYYEDFDREDADAFIENRAPENDATPLDQL
LDHDLRESVVAAIEALPEREKLMMSLYYEQDLNLREIGAVMGVSESRVCQIHSQAIARIR
SRLRERAWLPTPG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgcgccaaaggcaggcatggacatgtataccgctaccggtcgcaagaccaag
tccgacgaaatggccgcgtacgcaccgctggtgcgccgcattgccaaccagatgatggtg
aagctgccggccagcgtcgaactcgacgacctgatccaggccggcatgatggggttgctc
gacgcgctgtcgcgctacgaagaaacccagggcgtgcagttcgagttctatgccgcccaa
cgtatccgcggcgccatcctggatgagctgcgaggttcggactggctgccgcgcgggctg
cgccgcaacgcgcgcaccatcgagcaggcgatccagaagctgcagcagcagaagggccgc
gcgccgaccgagaccgagattgccgccttcctgaacatgtcgctggccgactaccagaag
ctgctggtggagctgcagggcagccagctgctgtactacgaagacttcgaccgcgaagac
gccgacgccttcatcgagaaccgcgcccccgagaacgacgcgacgccgctcgaccaactg
ctcgaccacgatctgcgcgagtcggtggtcgccgccatcgaggcgctgcccgagcgcgag
aagctgatgatgagcctgtactacgagcaggacctgaacctgcgcgagatcggcgccgtg
atgggtgtgtcggaatcgcgcgtgtgccagatccacagccaggccatcgcccgcatccgc
tcgcgcctgcgcgagcgggcctggctgccgacgccgggctga
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integrated database retrieval system
