Ralstonia solanacearum Po82: RSPO_c00357
Help
Entry
RSPO_c00357 CDS
T02005
Symbol
sbcB
Name
(GenBank) exodeoxyribonucleaseIprotein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSPO_c00357 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsn03400
]
RSPO_c00357 (sbcB)
Enzymes [BR:
rsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
RSPO_c00357 (sbcB)
DNA repair and recombination proteins [BR:
rsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RSPO_c00357 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RSPO_c00357 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSPO_c00357 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEG67661
UniProt:
F6G6W6
LinkDB
All DBs
Position
372958..374427
Genome browser
AA seq
489 aa
AA seq
DB search
MPASLRCPTRLTVTHTFLWHDYETFGAVPRRDRPAQFAGIRTDAELNEIGEPVELFCQPS
SDWLPDPTSCLITGITPQQCRRQGIPEYRFAQAIERELATPGTIGVGYNSIRFDDEVTRH
LFWRNLIGPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSKANG
LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIGETPRPLLHVSGM
YGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSVELAEGTT
RLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVYAR
ELDPIEDVDQNLYGGFVANGDRRTLNELRALSGEQLARLHPDFADARLPELLFRYRARNF
PDTLTEDEYEQWEQLRAERLFEGSGGYLTFEAFGERLQQLGAEAAESGDARAQNILQDLY
DYAQQIVPG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccggcatctttgcgatgcccaacccgcctgaccgtgactcacaccttcctttggcac
gactacgaaaccttcggcgccgtgccgcgccgcgatcgcccggcccagttcgccggtatc
cgtaccgatgccgagctcaacgagatcggcgagccggtcgagctgttctgccagccgtcc
agcgactggctgcccgatccgacgtcctgcctgatcaccggcatcacgccgcagcagtgc
cgccggcagggcattcccgaataccgcttcgcgcaggccatcgagcgcgaactggccacg
cccggcaccatcggcgtcggctacaactccatccgcttcgacgacgaggtcacgcgccac
ctgttctggcgcaacctgatcggcccatatgcgcgcgaatggcagaacgaatgcggtcgc
tgggatctgctcgatgtcgtgcgcaccacctgggcgctacgcccggacggcgtggaatgg
cccaagaacggcgacggcaagcccagcttcaagctggagcacctatcgaaggccaacggc
ctgctgcacgaagccgcgcacgatgcgctgtcggacgtgcgcgccaccatcgcactggcg
cggcgggtccgtgacgcgcagccgcgcctgttcgacttctgcttcgcgctgcgcaagaag
gagcgcgtgctggccgagatcggcgagacgccgcggccgctgctgcatgtctcgggcatg
tacggcgtggagcggggctgcatggcggtggtgtggccgctgggctggcacccgaccaac
aagaacgagctgctggtgtgggacctcgcctgcgatccggccgagctgttcgacctcggc
gtcgacaccatccgcgagcgcctgttcacgcgcagcgtggagctggccgaaggcaccacg
cgcctgcccgtcaagtcgatccacatcaacaaggcgcccatcgtgatcggcaacctgaag
acgctgcagccggcgcaggccgagcgctggggtgtcgacttcgccgccatcgagcggcac
gccgccgccgcgcagggcgcccccgacatgcgcgagacctggcgccaggtctacgcccgc
gaactcgatccgatcgaggacgtggaccagaacctctacggtggcttcgtcgccaacggc
gaccgccgcacgctcaacgaactgcgcgcgctctcgggcgaacagctcgcgcgcctgcac
ccggattttgccgatgcccgcctgcccgaactgctgttccgctatcgcgcgcgcaacttc
cccgacacgctcacggaagacgagtacgagcagtgggagcagctgcgtgccgaacgcctg
ttcgagggcagcggcggctacctgaccttcgaagccttcggtgagcggctccagcagctg
ggcgccgaagctgccgagtccggtgatgcacgcgcgcagaacatcctgcaagacctgtac
gactacgcgcagcagatcgtgccgggctga
DBGET
integrated database retrieval system
