Ralstonia solanacearum Po82: RSPO_c00470
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Entry
RSPO_c00470 CDS
T02005
Symbol
recQ
Name
(GenBank) atp-dependent dna helicase protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPO_c00470 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsn03019
]
RSPO_c00470 (recQ)
03400 DNA repair and recombination proteins [BR:
rsn03400
]
RSPO_c00470 (recQ)
Enzymes [BR:
rsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSPO_c00470 (recQ)
Messenger RNA biogenesis [BR:
rsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSPO_c00470 (recQ)
DNA repair and recombination proteins [BR:
rsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSPO_c00470 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
AEG67773
UniProt:
F6FXP0
LinkDB
All DBs
Position
504316..506262
Genome browser
AA seq
648 aa
AA seq
DB search
MHVTPRAPAVPMFDSPAIDHALDALPEDTAAATRAVLHDVFGYSAFRGPQADIVTHVADG
GDCLVLMPTGGGKSLCYQIPALVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLN
SALTGTEAAQVERDLAAGRLDLVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGH
DFRPEYIQLSVLHERFPHVPRIALTATADAVTRDEIVERLALGGERVFLSSFDRPNIRYT
IVEKDSARQQLLRFIRAEHLGEDGCDAGIVYCLSRKKVEETAQWLAEQGIRALPYHAGMD
VETRARHQAIFRKEEGVVMVATIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDG
LPANAWMAYGLADVVQQRRMIDESDADDVHKRVSTAKLDALLGLCESAGCRRVALLAYFG
ESSQPCGNCDTCLSPPQTWDATREAQMALSCVYRVQQASRVSFGAGQLIDILRGNATERV
KQWHHETLSTFGVGDTLSEAAWRGVFRQLVAQGLLAVDHGGHGALVLTDAARPVLKGEHS
VTLRRQAEKVRAAPASGAKAERRADPAADLSVEAQMRWQALRVWRAQTAREHSVPAYVIF
HDSTLAHIAESDPASREALAELPGIGVAKLDRYGQALLDVLAKCRGES
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ctgcacgtgacaccgcgcgcacccgccgtcccgatgttcgattcccccgccattgaccac
gcgctcgacgcgttgcccgaagacacggccgccgccacgcgcgccgtgctgcacgacgtg
ttcggctacagcgcgttccgcgggccgcaggcggacatcgtcacgcacgtcgccgacggc
ggcgattgcctggtgctgatgcccaccggcggcggcaagtcgctgtgctaccagattccc
gccctggtgcggcaccggcgcggccagggcgcgggcatcgtggtctcgccgctgatcgcc
ctgatgcaggaccaggtggccgcgctggaagaagcgggcgtgcgtgccgcctacctgaac
tccgcgctgaccggcaccgaggccgcgcaggtcgagcgcgatctggcggccggccggctc
gacctcgtctacgtcgcgcccgagcggctgatgacgccgcgcttcctcgaactgctggag
cgctcgcgcatcggcctgttcgccatcgacgaggcgcactgcgtgtcgcagtgggggcac
gatttccggccggagtacatccagctctccgtgctgcacgagcgtttcccgcacgtgccc
cgcatcgcgctgaccgccaccgccgatgccgtcacgcgcgacgagatcgtcgagcggctg
gcgctgggcggcgagcgcgtcttcctctccagcttcgaccgtcccaacatccgctacacc
atcgtcgagaaggacagcgcgcgccagcaactgctgcgcttcatccgcgccgagcacctc
ggcgaggacggttgcgatgccggcatcgtctattgcctgtcgcgaaagaaggtggaggag
accgcgcagtggctggccgagcagggcatccgcgcgctgccgtaccacgccggcatggac
gtcgagacgcgcgcgcgccaccaggccatcttccgcaaggaggagggcgtggtgatggtg
gcgaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcccacttg
gacttgcccaagagcctggagggctactaccaggaaaccggccgcgccggccgcgacggt
ctgcccgccaacgcctggatggcctacggcctggccgatgtcgtgcagcagcgccgcatg
atcgacgagtccgacgccgacgacgtgcacaagcgcgtctccacggccaagctcgatgcg
ctgctggggttgtgcgaatcggccgggtgccggcgcgtggcgctgctggcgtactttggc
gagtccagccagccgtgcggcaactgcgacacctgcctgagcccgccgcagacctgggat
gccacccgcgaggcgcagatggcgctgtcgtgcgtgtaccgcgtgcagcaggccagccgc
gtgagcttcggcgctggccaactgatcgatatcctgcgcggcaacgccaccgagcgcgtc
aagcagtggcatcacgagacgctgtccaccttcggcgtcggcgataccctgtccgaggcc
gcctggcgtggcgtcttccgccaactggtggcgcagggcctgctggcggtcgatcacggc
ggccatggcgcgctggtgctgaccgacgccgcgcgccccgtgctcaagggcgagcacagc
gtgaccctgcggcgccaggccgagaaggtgcgcgccgcacccgcgtccggcgccaaggcc
gagcgccgcgcggaccccgccgccgacctgtcggtcgaggcccagatgcgctggcaagcg
ctgcgcgtctggcgggcccagaccgcgcgcgagcacagcgtgcccgcctatgtgatcttc
catgacagcacgctcgcccacatcgccgaatccgatcccgcttcgcgcgaggcgctggcc
gagctgcccggcatcggtgtcgccaagctggatcgctacgggcaggccttgctcgacgtg
ctggcgaagtgccggggtgaaagctaa
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