Ralstonia solanacearum Po82: RSPO_c01219
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Entry
RSPO_c01219 CDS
T02005
Name
(GenBank) atp-dependent rna helicase protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPO_c01219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsn03019
]
RSPO_c01219
Enzymes [BR:
rsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RSPO_c01219
Messenger RNA biogenesis [BR:
rsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSPO_c01219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AEG68520
UniProt:
F6FZF3
LinkDB
All DBs
Position
1291010..1292497
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AA seq
495 aa
AA seq
DB search
MNTETTSTAPSSDSVTFDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQ
TGTGKTAGFSLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTAL
RSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDM
GFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVI
YTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKT
QIERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAG
ASGDALSLFAPGDERLLADIEKLIKRNLPREALVDFDPTGEQARDRDRRERDERRNRTEI
RRSRERDERNGARVLDHTVVRPPFRPSEDPFFSRPYESNAPAETAESAKPAQTAGHPRSA
KRPIAALLGGVPRKR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgagacaacgtctacagcaccgtccagcgattcggtgacgttcgacactttc
ggcctgcacccggatatcctgcgggccctgaccgagagcggttatacccggcccacaccg
atccaggccgccgcgattcccgtggtggtcggcggccgcgacgtgatgggcgcggcgcag
accggcaccggcaagaccgccggtttctcgctgccgatcatccagaacctgctgccggaa
gccaacaccagcgcctcgccggcgcgccacccggtgcgggcgctgatcctcacgcccacg
cgcgagctggccgaccaggtctacgacaacgtcgccaagtacgcgaagtacacggcgctg
cgcagcgcggtcgtgttcggcggtgtcgacatgaacccgcagaccgagcaactgcgccgc
ggcgtggaaatcctcgttgccacgccgggccgcctgctcgatcacgtgcagcaacgcagc
gtgaacctgtcgcaggtgcgcatgctggtgctggacgaagccgatcgcatgctcgacatg
ggcttcctgcccgacctgcagcgcatcatcaacctgctgccggcgcatcgccagacgctg
ctgttctcggccacgttctcgcctgagatcaagaagctggcggcgagctacctgcgccat
ccgcagaccatcgaagtggcgcgcagcaacgccaccgccgacaacgtccgccaggtcatc
tacaccgtgcccgatggccacaagcaggctgccctggtgcacctgctgcgccagcgcgcc
gagcagggcctgccgagccagtgcatcgtgttctccaacagcaagatcggctgttcgcga
ctggccagggcgctcgagcgcgagaagatcaacgccaatgccatccacggcgacaagacc
cagatcgaacgcatgcagacgctcgaggcgttcaagcagggtacggtcgacgtgctggtc
gccaccgacgtggcggcgcgcggcctcgacatctcgcagatgccctgcgtgatcaacttc
gacctgccgttcaatgcggaagactacgtccaccgcatcggccgcaccggccgtgccggc
gcctcgggcgatgcgctgtcgctgttcgctccgggcgacgagcggctgctggccgacatc
gagaagctgatcaagcgcaacctgccgcgcgaggcacttgtcgatttcgatccgaccggc
gaacaggcccgcgatcgcgaccgccgcgagcgcgacgagcgccgcaaccgcaccgagatc
cgccggtcccgcgagcgcgatgagcgcaacggtgcacgggtgctcgaccacacggtggtg
cgcccgccattccggccgtccgaagatccgttcttctcgcgtccgtacgagtcgaatgcg
cccgccgagacggcagaaagcgccaagccggcgcagaccgccggccacccgcgcagcgcc
aagcgtccgatcgcagccctgctgggcggcgtgccgcgcaagcgttga
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