Ralstonia solanacearum Po82: RSPO_c01367
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Entry
RSPO_c01367 CDS
T02005
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPO_c01367 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsn03019
]
RSPO_c01367 (pnp)
03016 Transfer RNA biogenesis [BR:
rsn03016
]
RSPO_c01367 (pnp)
Enzymes [BR:
rsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RSPO_c01367 (pnp)
Messenger RNA biogenesis [BR:
rsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RSPO_c01367 (pnp)
Transfer RNA biogenesis [BR:
rsn03016
]
Prokaryotic type
tRNA degradation factors
RSPO_c01367 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_NusA_2nd
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AEG68667
UniProt:
F6G084
LinkDB
All DBs
Position
1440879..1443053
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AA seq
724 aa
AA seq
DB search
MFNKIVKEFQWGNHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNPKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVVHVLSI
NPEVPADIPALVAASAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLVVA
GTERAVLMVESEAQQLSEEVMLGAVVYGHEQMQIAINAIHDLVREGGKPEWDWQAAPKNE
ALVAKVSELGLADLQAAYQLRQKSARSQKLKEVYASVAAKLAEAGVEADGVEVDNILFEL
ESKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGTKS
DEQIIDALQGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKDDE
FAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVLTD
ILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQSA
MGHARTELSAHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIQEDGTITIAST
SSEGMAEAKRRIEGITAEAEVGKIYSGTVLKLLDFGAIVNILPGKDGLLHISEIANERVN
QVSDYVKEGQLVRVKLLSTDEKGRMRLSIKAAKAEEGDVPAAAPQAPGAGDAVSQQQQQQ
QQQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcgtcaaggaattccagtggggcaaccacaaggtgcgcatggagacg
ggcgagatcgcccgccaggccagcggcgccgtgctgctcgacatggacgacaccgtggtg
ctggccaccgtggtgggcgccaagaaccccaagccgggccaggatttcttcccgctgacc
gtcgactacatcgagaagacctacgctgccggcaagatcccgggcggcttcttcaagcgt
gaaggccgtccgtctgaaaacgagacgctgacctcgcgtctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtggtcgtgcacgtgctgtcgatc
aacccggaagtgccggccgacatcccggcgctggtggctgcctcggccgcgctggccgtg
tcgggcctgccgttcaacggcccggtgggcgccgcccgtgtgggttacaaggatggccag
tacctgctgaacccgaatcgcgcgcaactggcgcattcggacctggacctggtggtggcc
ggcaccgagcgtgccgtgctgatggttgagtcggaagcgcagcaactgtcggaagaagtc
atgctgggcgccgtggtgtacggccacgagcagatgcagatcgccatcaacgcgattcac
gacctggtgcgcgaaggcggcaagccggagtgggattggcaagccgctcccaagaacgaa
gcgctggtcgccaaggtgtccgaactgggcctggccgatctgcaagccgcttaccagttg
cgccagaagtcggcccgcagccagaagctgaaggaagtctacgcctcggtcgcggccaag
ctggccgaagccggcgtggaagccgacggcgtggaagtcgacaacatcctgttcgagctc
gagtcgaagatcgtgcgcggccagatcctgaacggcgaaccgcgtatcgacggccgcgac
acccgcacggtgcgcccgatcgagatccgctcctcggtgctgccgcgcgcgcacggttcg
gcgctgttcacgcgcggtgagacgcaggcgctggtggtggccacgctgggcaccaagagc
gacgagcagatcatcgacgcactgcagggcgagtaccgcgaccgcttcatgctccactac
aacatgccgccgttcgccaccggcgagaccggccgcgtgggcagcccgaagcgccgcgag
atcggccacggccgcctggccaagcgcgcactgatcccggtgctgccgaaggacgacgaa
ttcgcctacacgatccgcctggtgtcggagatcaccgagtcgaacggctcgtcgtcgatg
gcttccgtctgcggcggctgcctggcgctgatggatgccggcgtgccggtcaaggcgcac
gtggccggcgtggccatgggcctgatcctggaaggcaacaagttcgccgtgctgaccgac
atcctgggcgacgaagatcacctgggcgacatggacttcaaggtggcgggtaccgacaac
ggcatcaccgcgctgcagatggacatcaaggtccagggcatcaccaaggaaatcatgcag
gtcgcgctggcgcaagccaaggaaggccgcctgcacatcctgggcaagatgcagtccgcg
atgggccacgcccgcaccgagctgtcggcgcacgcaccgcgcatgatcaccgtcaagatc
aacccggagaagatccgcgacgtgatcggcaagggcggctcgaccatccaggcgctgacc
aaggaaaccggctgcacgatcgacatccaggaagacggcacgatcaccatcgcgtcgacc
tcgtccgagggcatggccgaagccaagcgccgcatcgaaggcatcacggccgaagccgaa
gtgggcaagatctacagcggcaccgtgctcaagctgctggacttcggcgcgatcgtcaac
atcctgccgggcaaggacggtctgctgcacatctcggaaatcgccaacgagcgtgtcaac
caggtgtcggactacgtcaaggaaggccagctggtgcgcgtgaagctgctgagcaccgac
gagaagggccgcatgcgtctgtcgatcaaggccgccaaggccgaggaaggcgacgtgccg
gccgccgcgccgcaggcaccgggtgccggcgacgccgtgtcgcagcagcagcaacagcaa
cagcaacagcagtaa
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