Ralstonia solanacearum Po82: RSPO_c02179
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Entry
RSPO_c02179 CDS
T02005
Symbol
addA
Name
(GenBank) recombinational repair-like protein, atp-dependent exodnase (exonuclease v) beta subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rsn
Ralstonia solanacearum Po82
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsn03400
]
RSPO_c02179 (addA)
Enzymes [BR:
rsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSPO_c02179 (addA)
DNA repair and recombination proteins [BR:
rsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RSPO_c02179 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEG69476
UniProt:
F6G343
LinkDB
All DBs
Position
complement(2278153..2281695)
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AA seq
1180 aa
AA seq
DB search
MSDHAYERDGAPVSPEAFSRAACDPQRSVVVEACAGSGKTWLLVTRMLRLLLAGAAPSDI
LAITFTRKAAEEMRQRLLDSLAQLAGADDAAAVRELVARTVDERDAPGLVATARGLYARV
LESPSRMAIDTFHGWFGGLLRGAPLSSGVPQGASLREDAGRLRREAWAPFWRRLLAEEHA
ELRAAYDTLVDLVGDFQAGRLLDAMFAQRSDWWAYKAQAGAHPLGPLDDLLGDDAHTDPL
IEALQDAALLADMLRVSGWLGQGGAAEGKRAVQIETAVTAARALDLSDAAARRDAFEALF
TAFHTQAGKPRACKPTKALVKAIGEGSAQALVDLHGTLCEALAAYHARRHESRVRAINAA
LFTLGDALIERYQAYKRQARAMDFTDLEWEAARLMRDEDTAAYLQVRLDARYKHLLLDEF
QDTNPMQWRILQGWLRGYEGTGTRPTVFLVGDPKQSIYRFRRADARLFDAARDMLVAGFD
ATVLRTNRTRRNAPAVLEWVNAVFLQARARGDYAIYAEQCTAVDAPAGQALLLPLVPVPE
AVQTGETGETAPRDSLTEPREEAGDSQRYDEGRQVAACLRALHVGERVRENGDGRPVRWS
DFQLLVRRKRYLADYERALRDAGVPYLSPRRGGLLATLEALDLCALLDFLMTPQADLPLA
HVLRSPIFAVTDGDLIALAQTGEGASAPTWWERLTALAGQPHAAAQLRHAHRLLSRWLAV
APTLPVHDLLDHIVYTGELKRRYAERVPEVNREQALANLDAFLKLALDLDGGRYPSLPKF
MAELRAIRQGDEEESPDEGVQGDAAEAPDAIDAELASDGLDAVQILTVHASKGLEAPFVV
LLDSHHSDTRADTVGILIDWLPGAEAPAHFSAFGKTAERGRARDPLFAQEAALAERENWN
LLYVAMTRARQALIVSGVANKRDGAAAQAVDEGDVSEVDGSASWYTLLATAGVATPAPAA
QADAGGDAVHAGPQAVSYHDFRVPLTVTVRIGGTAERVADAPNAADAIFDQGAVAQGELL
HAVLERLTRHGKPEQVPDAAAIARWFGATGITDADAARAAEAVRRMLAAEALAHVFDAAR
FDVAHNEVELFSPDGALLRIDRLIERGDEVLVVDYKLRLLPVERAAYADQLRGYVAAVAP
MYPGCTVRAGVATAQGEWIDLDALPKPAKASHDATQGALF
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccacgcttatgagcgcgacggcgcaccggtctcgcccgaggcgttttcgcgt
gccgcatgcgacccgcagcgctcggtggtggtggaggcctgcgccggcagcggcaagacc
tggttgctggtgacgcgcatgctgcggctgctgttggcgggggcggcgccctcggatatc
cttgccatcaccttcacgcgcaaggcggccgaagagatgcggcagcgcttgctcgatagc
ctcgcgcaactggccggtgccgacgacgcggcagcggtgcgcgaactggttgcccgcacc
gtcgacgaacgcgatgcgccggggctggttgccacggcgcgcgggctgtacgcgcgggtg
ctggagtcgccgtcgcgcatggcgatcgatacctttcacggctggttcggcggcctgttg
cgtggggcgccgctgtcgtcgggcgtgccacagggggcctcgctgcgcgaagacgcgggc
cgcctgcgccgcgaagcctgggcgccgttctggcgccgcctgctggccgaagaacatgct
gaactgcgtgcggcctacgacacgctcgtcgacctggtcggcgatttccaggccggccgc
ctgctcgatgcgatgttcgcgcagcgcagcgactggtgggcctacaaggcgcaggcgggc
gctcacccgctgggcccgctcgatgacctgctcggcgacgacgcccataccgatccgctg
atcgaggcgctgcaggacgccgcgttgcttgccgacatgctgcgcgtgtcgggctggttg
gggcaaggcggcgcggcggagggcaagcgcgccgtgcagatcgaaacggcggtgacggcg
gcgcgcgcgctcgacctgtcggatgcggccgcgcgccgcgatgcgttcgaggcgctgttc
accgcgttccatacgcaggccggcaagccgcgtgcatgcaagcccaccaaggcgctggtc
aaggccatcggcgaaggcagcgcacaggcgctggtcgacctgcacggcacgctgtgcgag
gccctggccgcttaccacgcgcgccgccacgagagccgcgtgcgtgccatcaatgccgcg
ctgttcaccctcggtgatgcgctgatcgagcgttaccaggcctacaagcgccaggcgcgc
gcgatggacttcaccgacctcgaatgggaagccgcccgcctgatgcgcgacgaagacacc
gccgcctacctgcaggtgcggctggacgcgcgctacaagcacctgctgctcgacgagttc
caggacaccaacccgatgcagtggcgcatcctgcaagggtggctgcgcggctacgagggc
accggcacgcggccgacggtgttcctggtgggcgacccgaagcagtcgatctaccgtttc
cgccgcgccgatgcacgcctgttcgatgccgcgcgcgacatgctcgtcgccgggttcgac
gccaccgtgctgcgcaccaaccgcacgcgccgcaacgcgccggccgtgctggagtgggtc
aacgccgtcttcctgcaggcgcgtgcgcggggcgactatgccatctacgccgagcagtgc
accgccgtcgatgcccccgccggccaggcgttgctgctgccgctcgtgccggtgccggaa
gccgtgcagaccggcgagaccggcgagaccgcgccgcgcgattcgctgaccgagccgcgc
gaagaggccggcgattcgcagcgctacgacgaaggccgccaggtcgccgcctgcctgcgt
gcgctgcatgtcggcgaacgcgtgcgcgagaacggtgatgggcgccccgtgcgctggagc
gatttccagctgctcgtgcgccgcaagcgctacctggccgactacgagcgggccctgcgc
gatgccggcgtgccgtacctgagcccgcgccgcggcggcctgctggcgacgctcgaggcg
ctggacctgtgcgcgctgctcgatttcctgatgacgccgcaggccgacctgccgctcgcg
catgtgctgcgcagcccgatcttcgccgttaccgatggcgacctgatcgcgctggcgcag
accggcgaaggcgcgtccgcgccgacatggtgggagcggctgacggcgctcgccggccag
ccgcacgccgccgcgcagttgcgccacgcgcaccggctgctgtcgcgctggctggcggtg
gcgcccacgctgccggtgcacgacctgctcgatcacatcgtctacaccggcgagctgaag
cgccgctacgccgagcgtgtgcccgaggtcaaccgcgagcaggcgctggccaacctcgat
gccttcctcaagctcgcgctcgatctggacggcggccgctacccgagtctgccgaaattc
atggccgagctgcgcgccatccgtcagggcgacgaagaggaaagccccgacgaaggcgtg
cagggcgatgcggccgaagcgccggacgccatcgacgccgaactcgccagcgacggcctg
gacgccgtgcagattctgaccgtgcacgcgtcgaaggggctggaggcgccgttcgtcgtg
ctgctcgacagtcaccacagcgacacccgggccgacaccgtgggcatcctgatcgactgg
ttgcccggcgccgaggccccggcgcatttctccgccttcggcaagaccgccgagcgcggc
cgcgcccgcgatccgctgttcgcgcaggaagccgcgctggccgagcgcgagaactggaac
ctgctctacgtggcgatgacgcgcgcgcggcaggcgctgatcgtctccggcgtcgccaac
aagcgcgatggcgcggcggcccaggcggtggacgaaggcgatgtgtcggaagtcgacggc
agcgcgagctggtacaccttgctggcgacggccggcgttgccacacccgcgcccgcggcg
caagcggacgccggcggcgatgcggtccacgccgggccgcaggccgtctcgtaccacgac
ttccgcgtgccattgacggtcactgtgcggatcggcggcacggccgaacgcgtggccgat
gcaccgaacgccgccgatgcgattttcgatcagggcgccgtcgcgcagggcgaactgctg
catgccgtcctggagcggctgacgcgccacggcaagccggagcaggtgccggatgccgcc
gccatcgcgcgctggttcggcgcgaccggcatcaccgacgcggacgccgcgcgcgcggcc
gaggctgtgcgccgcatgctggccgccgaagcgctggcgcatgtgtttgacgccgcgcgc
ttcgacgtcgcgcacaacgaggtcgagctcttcagcccggacggcgcgctgctgcgcatc
gaccggctgatcgagcggggtgacgaggtgctggtggtcgactacaagctgcgcctgctg
ccggtcgaacgcgcagcctatgccgatcaactgcgcggctacgtggccgccgtcgcgccg
atgtacccggggtgcacggtgcgtgccggcgtggcgaccgcgcagggcgagtggatcgat
ctggatgcgttgcccaagccggccaaggcatcacacgacgctacccagggcgcgctgttc
tga
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