Ralstonia solanacearum Po82: RSPO_c02847
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Entry
RSPO_c02847 CDS
T02005
Name
(GenBank) ATP-dependent rna helicase protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSPO_c02847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsn03019
]
RSPO_c02847
Enzymes [BR:
rsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RSPO_c02847
Messenger RNA biogenesis [BR:
rsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSPO_c02847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Sacchrp_dh_NADP
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AEG70139
UniProt:
F6G415
LinkDB
All DBs
Position
complement(2970922..2972946)
Genome browser
AA seq
674 aa
AA seq
DB search
MQEQSKKTRRHHQVQVNASDHLSAQTLTPRSCLQQKFEEGGVIRGALFFAYFLRRDGASR
SAPAAGKTQDAPRRPNQNPLSAGHTRHPVKLPPFAVPGVQSPRHLPRLCPRLAHERMRGT
RRSNRFSMSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTA
GFTLPLLHRLSAAQPNKVHTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMV
MFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIH
DIRKILNILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVD
RERKRELLAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGISALAIHGNKSQSARTRAL
SEFKAGTLRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISL
VCVDEHGLLRDIERLIKRELPRTVLEGFEPDPTIAPEPIPNGRNNARGPRQGGGRGQQQP
RQANGNAAPREPRAPREPREPRRESSGNGQGQSQGQGQGRNGGGRQRQAQGQRDGQAAPK
PRNGHGNGNGNGNGNGQSHARGQRQGNGQGSGQGGQRRASNTQAAQPAQVAQPAKQPFNG
LFAKAAALLGGRKG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagagcaaagcaaaaagactcggcgccatcaccaggtacaggtcaatgccagcgat
cacctaagcgctcagacgttgacccctcgctcctgcctgcaacagaaattcgaggagggg
ggcgtcatccggggtgcgcttttctttgcttattttcttcggcgagacggagcaagccgg
tcggccccggcagcgggcaaaacgcaggatgcaccacgaaggcccaaccaaaacccgctt
tccgccggccatacacggcatcctgttaaactaccgcccttcgcagtccccggggtccag
tcgccccgtcacctacccaggctctgtccacgattggcgcacgaacgaatgcgcgggaca
cgccggtccaatcgcttttccatgtcgttttccgaactcggcttgtcagacaagctggta
cgcgccgttgccgaactcggctacgcagaacccaccccgattcaacgccaggccatcccc
gccatcctcaagggcggtgacctgctcgccggtgcacagaccggcaccggcaagaccgcc
ggcttcacgctgccgctgctgcaccgcctgtccgccgcgcagcccaacaaggtgcacacg
ccgcatggcatgcgctatccgatccgtgccctggtgctcacgcccacgcgcgaactcgcc
gctcaggtggaagagagcgtgcgcgcctacggcaagtacttgccgctgaagtcgatggtg
atgttcggcggcgtcggcatcaacccgcagatcgatgcgctcaagcgcggcgtcgacatc
gtcgtggccacgccgggccgcctgctggaccacgtcggccagcgcaccatcgacctgtcg
cacatcgaactgctggtgctggacgaagccgaccgcatgctggacatgggcttcatccac
gatatccgcaagatcctcaacatcctgccgcccaagcgccagaacctgctgttctcggcg
acgttctcggacgacatccgcgcgctggccgaccgcctgctggatcagcccgcgctgatc
gaagtcgcgcgccgcaacaccaccgccgagacggtcgagcagcgcatctacccggtcgac
cgcgaacgcaagcgcgaactgctcgccaagctcgtgcgcgataacgactggcaccaggtg
ctggtcttcacgcgcaccaagcacggcgccaaccgcctggccgagcagctgacgcgcgac
ggcatctcggcgctcgccatccacggcaacaagagccagtcggcgcgcacgcgggcgctg
tcggagttcaaggccggcacgctgcgcgtgctggtcgccaccgacatcgctgcgcgcggc
atcgacatcgatcaactgccgcatgtggtcaacttcgacctgcccaacgtgccggaagac
tatgtgcaccgcatcggccgcaccggccgcgcgggtgcgcagggcgaggcgatctcgctg
gtgtgcgtggacgagcatggcctgctgcgcgacatcgagcgcctgatcaagcgcgaactg
cccaggaccgtgctggagggcttcgagccggatccgaccatcgcgcccgaaccgattccg
aacggccgcaacaacgcccgtggcccgcgccaaggtggcggccgtggccagcagcaaccg
cgtcaggccaacggcaatgccgcaccgcgcgagccgcgtgcgccgcgtgaaccccgcgaa
ccgcgccgcgagtcgagcggcaacggtcagggccagagccaaggtcagggccagggtcgc
aacggcggtggccgccagcgccaggcgcagggccagcgtgacggccaggctgcaccgaag
ccgcgcaacggtcatggcaatggcaatggcaatggcaatggcaatggccagtcgcacgca
cgtggccagcgccagggcaacggtcaaggcagcgggcagggtggtcagcgtcgtgcctcg
aacacgcaagccgcacagcccgcgcaagtggcacagccggccaagcagccgttcaacggc
ctgttcgccaaggcggcagcgctgctcggcggccgcaagggctga
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