Ralstonia solanacearum Po82: RSPO_c02996
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Entry
RSPO_c02996 CDS
T02005
Symbol
rpoN1
Name
(GenBank) rna polymerase sigma n (sigma 54) factor protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn02020
Two-component system
rsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSPO_c02996 (rpoN1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RSPO_c02996 (rpoN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsn03021
]
RSPO_c02996 (rpoN1)
Transcription machinery [BR:
rsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSPO_c02996 (rpoN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF2344
HTH_38
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEG70288
UniProt:
F6G492
LinkDB
All DBs
Position
3123226..3124725
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AA seq
499 aa
AA seq
DB search
MKQSLQLRLSQHLALTPQLQQSIRLLQLSTIELQQEVEQALTENPLLERENEWLDTSARI
GADGSVSALQSNSATPPPTESPPPAANGSDHADTAEASYENGSDFDSDYGSDRSDWSLDD
FARKPQSDEDDRAPMQLREAEPTLREFLMEQLAPLKLSMRDKGLVIFLIESLDDEGYLTG
SLDEILADLPAELEVELDELQAALRMLQSFDPAGIGARSAAECLTLQLQRLESPAKPLAL
AIVNQHLELLAARDYTRLKKALSVDEGALKAAHELIRSLAPFPGHAFGRAEADFVVPDVV
VRKTAAGWMAQLNPDVMPRLRINDMYAQILRSSRGESGAANLQQKLQEARWLIKNIQQRF
DTILRVSQAIVERQKSFFTHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPMGTF
ELKYFFGSHVSTETGGAASSTAIRALIKQLVGAEDPKNPLSDSRIAELLGEQGFVVARRT
VAKYREALKIPAVNLRKSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgctccagctccgtctctctcagcatctggcgctcacgccgcaactgcag
cagtcgatccggctgctgcagttgtcgaccatcgaactgcaacaggaagtcgagcaggcg
ctgaccgagaacccgctgctggagcgcgagaacgagtggctcgacacctccgcgcgcatc
ggcgccgatggttcggtcagcgcgctgcagagcaacagcgccaccccgccgccgaccgaa
tcgccgccgcccgccgccaacggctcggaccacgccgacacagccgaagcatcgtacgaa
aacggcagcgacttcgacagcgactacggctccgatcgctccgactggagcctcgacgac
ttcgcacgcaaaccccagtccgacgaagacgaccgcgccccgatgcagctgcgcgaggcc
gagcccacgctgcgcgaattcctgatggaacagctggcgccgctcaaattgtccatgcgt
gacaagggcctcgtcatcttcctgatcgagtcgctggacgacgaaggctacctgaccggc
tcgctcgacgagatcctcgccgacctgccggccgaactcgaggtcgaactcgacgaactg
caagccgcgctgcgcatgctgcagagcttcgacccggccggcatcggtgcacgctcggct
gcggaatgcctgacgctgcagttgcagcgcctggagtcgccagccaagccgctcgcgctg
gccatcgtcaaccagcatctcgagctgctcgccgcgcgcgattacacgcgcctgaagaaa
gcgctgtccgtcgacgaaggcgcgctgaaggccgcgcatgaactgatccgctcgctggcg
ccgttcccgggccacgccttcgggcgcgccgaggccgacttcgtcgtgcccgatgtcgtg
gtgcgtaaaaccgccgcaggctggatggcgcaactgaaccccgacgtgatgccgcgcctg
cgcatcaacgacatgtacgcgcagatcctgcgcagcagccgcggcgagtcgggcgccgcg
aacctgcagcaaaagctgcaggaagcgcgctggctgatcaaaaacatccagcagcgcttc
gacaccatcctgcgtgtctcgcaagcgattgtcgaacgtcaaaagagctttttcacgcac
ggcgaaatcgccatgcgccccttggttttgcgggaaatagccgatacactgggtctacac
gagtccacgatctcccgtgtgacgaccaacaagtacatggcgacccccatggggaccttc
gagctgaagtacttcttcggcagccatgtatcgacggaaaccggcggggccgcgtcatcc
accgcgatacgcgcgctcatcaagcaacttgtaggagccgaagacccgaagaatcctctg
tccgatagcagaattgccgagctgttaggcgaacaaggattcgtggtggcccgtcggacg
gtggccaagtaccgcgaagccctcaaaatcccagcagtgaatttgcgcaagtctttatag
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