Ralstonia pseudosolanacearum GMI1000: RSc0005
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Entry
RSc0005 CDS
T00071
Symbol
trmE
Name
(GenBank) probable trna modification gtpase trme protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rso03016
]
RSc0005 (trmE)
Transfer RNA biogenesis [BR:
rso03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RSc0005 (trmE)
Prokaryotic type
Methyltransferases
RSc0005 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Arf
Ras
Roc
MCM
MMR_HSR1_Xtn
GTP_EFTU
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAD13533
UniProt:
Q8Y3H5
LinkDB
All DBs
Position
3222..4667
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AA seq
481 aa
AA seq
DB search
MTASSHAMTSPTVSDAASAPIRTVPIAAIATAPGRGGIGVVRVSGPDVRAVMQAVCGRLL
PPRQATYLPFLDADGAAIDRGIALWFPAPHSYTGEDVLELQGHGGPVVMQLLLSRCLRAG
HGIGLRVAEPGEFTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAARSLDGVFSQTVHA
LVERVIHLRMLVEATLDFPEEEIDFLEAADARGQLADIRARLDGVLAQARQGALLREGLH
VVLAGQPNVGKSSLLNALAGAELAIVTPIAGTTRDKVQQTIQIEGIPLNIVDTAGLRDTE
DEVERIGIERTWAAIARADVVLHLLDAADYRAHGLSAEDAAIDARIAEHVPPGVPTLRVI
NKIDLAGAAVPGRVDAQPPEVWLSARDGSGIELLRAALLEIAGWQGGGEGLYLARERHLS
ALRSAREHLTIAADHADQRAQSLDLFAEELRLAQEALNSITGAFSSDDLLGVIFSRFCIG
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcttcccacgccatgacttcgccgactgtttccgatgcggcctccgcgccg
atccgtaccgtgcccatcgcggcgatcgccacggcgcccgggcgcggcggcatcggcgtc
gtgcgggtgtccggcccggatgtgcgcgccgtgatgcaggccgtgtgcgggcgcctcttg
ccgccgcgccaggcaacctacctcccctttctcgacgccgatggcgcggccattgatcgg
ggcatcgcgctgtggtttccggcgccgcattcctacaccggcgaggatgtgctcgagctg
cagggccacggcggcccggtggtgatgcagctgctgctgtcgcgctgcctgcgggccggc
cacggcatcggcctgcgcgtggccgagcccggcgagttcacgcgccgcgccttcctcaac
gacaagctggacctggcccaggccgaagccgtcgccgacctgatcgaggccagcaccgag
gccgccgcgcgctcggccgcgcgttcgctcgacggcgtgttctcgcagaccgtgcacgcg
ctggtcgagcgcgtgatccacctgcgcatgctggtggaggcgacgctggattttcccgag
gaggaaatcgacttcctcgaagccgccgacgcgcgcggccagctcgccgacatccgcgca
cggctggacggtgtgctggcgcaggcgcgccagggggcgctgctgcgcgagggcctgcac
gtggtgctggccgggcagcccaacgtcggcaagtcgtccctgctcaatgcgctggccggc
gccgagctcgccatcgtcacgcccatcgccggcaccacgcgcgacaaggtgcagcagacc
attcagatcgagggcattcccctcaacatcgtcgataccgccggcctgcgcgacaccgaa
gacgaagtcgagcgcatcggcatcgaacgcacctgggccgccatcgcccgcgcagacgtc
gtgctgcatctgctggatgcggccgactaccgtgcccacggcctgtccgccgaagatgcc
gccatcgacgcccgcatcgccgaacacgtgccgccgggcgtgcccacgctgcgcgtcatc
aacaagatcgacctggcgggcgcggctgtcccgggccgcgtcgatgcgcagcctcccgag
gtctggctgtcggcgcgcgacggcagcggcatcgagttgctgcgtgcggcgctgctggag
atcgccggctggcaaggcggcggcgaaggcctgtatctggcgcgcgagcggcacctgtcg
gcgctgcgctcggccagggagcacctgaccatcgccgccgatcacgcggaccagcgggcc
cagtcgctcgacctgtttgccgaggaattgcggctggcgcaggaagcgttgaacagcatc
acgggggcgttttccagtgatgatttgttgggggtgatttttagccggttttgtattgga
aagtag
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