KEGG   Ralstonia pseudosolanacearum GMI1000: RSc0062
Entry
RSc0062           CDS       T00071                                 
Name
(GenBank) probable substrate-binding transmembrane protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso00550  Peptidoglycan biosynthesis
rso01100  Metabolic pathways
rso01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rso00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RSc0062
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    RSc0062
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rso01011]
    RSc0062
Enzymes [BR:rso01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     RSc0062
Peptidoglycan biosynthesis and degradation proteins [BR:rso01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   RSc0062
SSDB
Motif
Pfam: Transpeptidase PBP_dimer bDLD3 PBP_dimer_2 MucB_RseB
Other DBs
NCBI-ProteinID: CAD13590
UniProt: Q8Y3B8
LinkDB
Position
67285..69690
AA seq 801 aa
MTEIRNVEQELSRFRVRLAAAALFVLVCFGLLLVRFFWLQSVKHEQYSAKAEDNRISVAP
IEPNRGIIMDRNGVVLARNYSAYTLEVTPSKLQDTLDNTIDQLAQVIDIQPRDRRRFKRL
MEDARSFESLPIRSQLTDQEVARFSAQRFRFPGVDVHARLFRQYPLGEAAAHVIGYIGRI
SERDLERIDDMSEANSQPNVTYDPRKDANNYSGTEYIGKVGIEQSYETELHGLTGYEEVE
VSAGGRPIRTLSTSQATPGNNLILSLDINLQRLAEQLFGNRRGALVAIEPETGDILAFVS
KPTFDPNLFIEGIDSATWSELNGSPDKPLLNRPLRGTYPPGSTYKPFMALAALELGKRTP
QWGMADPGSFTLGNHTFRDDVPGGHGWVDMYRSIVVSCDTYYYKLANDMGVNAIHDFMKP
LGFGQVTGIDIEGERTGILPSTEWKRKAYKRPEQQKWYDGETISLGIGQGYNNFTILQLA
HAVATLANNGGVMKPHLVKAVEDSVNKARTLTVPTESYRIPLKQANIDVIKRAMAGVVQA
GTAAKAFAGAQYAAAGKTGTAQVFSLGKGEKYNHHAIPEYKRDHALFEAFAPTDHPKIAV
ALIVENAGFGATSAAPIARAVFDYYLQGKWPAELAAIAPKVQPQPPVDTPSVFSTGKTAT
IASATATPQAAAEAVAQSAALAAAASGEQAADAATVGGASAPGASAVAAGAPRAAPAMSS
DRVAPALREAGTSAQAVAPATLDAQVLQALSHVQPAPDLPSPRGRNLPAAPASAPAASPK
DRKPAVKPNPKPAPKPARAAP
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaccgagatccgcaacgtcgaacaggagctgtcgcgctttcgcgtgcggctggccgcg
gccgcgctgttcgtgctggtgtgcttcgggctgctgctggtgcgcttcttctggctgcag
tcggtcaagcacgagcagtactcggccaaggccgaggacaaccgcatctcggtggcgccg
atcgagcccaaccgcggcatcatcatggaccgcaacggggtggtgctggcgcgcaactac
tcggcctacacgctggaggtcaccccgtccaagctgcaggacacgctggacaacaccatc
gaccagctcgcccaggtgatcgacatccagccgcgcgaccgtcgccgcttcaagcgcctg
atggaagacgcgcgcagcttcgagagcctgccgatccgcagccagctgaccgaccaggag
gtggcgcgcttctcggcacagcgcttccgcttcccgggcgtggacgtgcacgctaggctg
ttccgccagtacccgttgggcgaggcggcggcgcacgtgatcggctacatcggccgcatc
tccgagcgcgacctcgagcgcatcgacgacatgagcgaggccaacagccagcccaacgtc
acctacgatccgcgcaaggacgccaacaactacagcggcaccgagtacatcggcaaggtc
ggcatcgagcagagctacgagaccgagctgcacggcctgaccggctacgaagaagtcgag
gtcagcgcgggcgggcggccgatccgcacgctgtccacctcgcaggccacgcccggcaac
aacctgatcctgtcgctcgacatcaacctgcagcggctggccgagcagctgttcggcaac
cgccgcggcgcgctggtggcgatcgagcccgagaccggcgacatcctcgccttcgtctcc
aagcccaccttcgacccgaacctcttcatcgaaggtatcgacagcgccacctggagcgag
ctgaacggctcgcccgacaagccgctgctgaaccgcccgctgcgcggcacgtatccgccg
ggctcgacctacaagccgttcatggcgctggccgcgctggagctgggcaagcgcacgccg
caatggggcatggccgatcccggctcgttcacgctgggcaaccacaccttccgcgacgac
gtgccgggcggccacggctgggtcgacatgtaccgctccatcgtggtgtcgtgcgacacg
tactactacaagctcgccaacgacatgggcgtcaacgccatccacgatttcatgaagccg
ctcggcttcggccaggtcaccggcatcgacatcgagggcgagcgcaccggcatcctgccc
tccaccgagtggaagcgcaaagcctacaagcgtcccgagcagcagaagtggtacgacggc
gaaaccatctcgctgggcatcggccagggctacaacaacttcaccatcctccagctggcg
catgcggtggcgacgctggccaacaacggcggcgtgatgaagccccacctggtcaaggcc
gtcgaggattccgtcaacaaggcccgcacgctgacggtgccgaccgagagctaccggatt
ccgctcaagcaggccaacatcgacgtgatcaagcgcgcgatggccggggtggtccaggcc
ggcacggcggccaaggcgtttgccggcgcgcaatatgccgcggcgggcaagaccggcacg
gcgcaggtgttctcgctcggcaagggcgagaagtacaaccaccatgccattcccgaatac
aagcgcgaccacgcgctgttcgaggccttcgcgccgaccgaccacccgaagatcgcggtg
gcgctgatcgtcgagaacgcgggcttcggcgccacctcggccgcgccgatcgcgcgcgcg
gtgttcgactactacctgcagggcaagtggccggccgagctggcggccatcgcgcccaag
gtccagccgcagccgccggtcgatacgccgagcgtgttctccaccggcaagaccgccacc
atcgccagcgccacggccacgccgcaggcagccgcggaggcggtggcgcagagcgcggcc
ctggccgcggccgcatccggcgagcaggctgccgatgcagccacggtgggcggcgcgtcc
gcgccgggcgcttcggccgtggcggccggcgcaccgcgcgccgcgccggcgatgtcgtcc
gatcgggtcgcgcccgcgctgcgcgaggccggcaccagcgcccaggcggtcgctccggcc
acgctggacgcccaggtgctgcaggcgctgtcgcacgtccagcccgcccccgacctgccg
agcccgcgcggccgcaacctgccggcggcaccggcttccgcgccggccgcctcgcccaag
gaccgcaagcccgcggtcaagcccaatcccaagcctgcgcccaaaccggcacgggccgct
ccctga

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