Ralstonia pseudosolanacearum GMI1000: RSc0062
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Entry
RSc0062 CDS
T00071
Name
(GenBank) probable substrate-binding transmembrane protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00550
Peptidoglycan biosynthesis
rso01100
Metabolic pathways
rso01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSc0062
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSc0062
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
RSc0062
Enzymes [BR:
rso01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSc0062
Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSc0062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
PBP_dimer_2
MucB_RseB
Motif
Other DBs
NCBI-ProteinID:
CAD13590
UniProt:
Q8Y3B8
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All DBs
Position
67285..69690
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AA seq
801 aa
AA seq
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MTEIRNVEQELSRFRVRLAAAALFVLVCFGLLLVRFFWLQSVKHEQYSAKAEDNRISVAP
IEPNRGIIMDRNGVVLARNYSAYTLEVTPSKLQDTLDNTIDQLAQVIDIQPRDRRRFKRL
MEDARSFESLPIRSQLTDQEVARFSAQRFRFPGVDVHARLFRQYPLGEAAAHVIGYIGRI
SERDLERIDDMSEANSQPNVTYDPRKDANNYSGTEYIGKVGIEQSYETELHGLTGYEEVE
VSAGGRPIRTLSTSQATPGNNLILSLDINLQRLAEQLFGNRRGALVAIEPETGDILAFVS
KPTFDPNLFIEGIDSATWSELNGSPDKPLLNRPLRGTYPPGSTYKPFMALAALELGKRTP
QWGMADPGSFTLGNHTFRDDVPGGHGWVDMYRSIVVSCDTYYYKLANDMGVNAIHDFMKP
LGFGQVTGIDIEGERTGILPSTEWKRKAYKRPEQQKWYDGETISLGIGQGYNNFTILQLA
HAVATLANNGGVMKPHLVKAVEDSVNKARTLTVPTESYRIPLKQANIDVIKRAMAGVVQA
GTAAKAFAGAQYAAAGKTGTAQVFSLGKGEKYNHHAIPEYKRDHALFEAFAPTDHPKIAV
ALIVENAGFGATSAAPIARAVFDYYLQGKWPAELAAIAPKVQPQPPVDTPSVFSTGKTAT
IASATATPQAAAEAVAQSAALAAAASGEQAADAATVGGASAPGASAVAAGAPRAAPAMSS
DRVAPALREAGTSAQAVAPATLDAQVLQALSHVQPAPDLPSPRGRNLPAAPASAPAASPK
DRKPAVKPNPKPAPKPARAAP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatccgcaacgtcgaacaggagctgtcgcgctttcgcgtgcggctggccgcg
gccgcgctgttcgtgctggtgtgcttcgggctgctgctggtgcgcttcttctggctgcag
tcggtcaagcacgagcagtactcggccaaggccgaggacaaccgcatctcggtggcgccg
atcgagcccaaccgcggcatcatcatggaccgcaacggggtggtgctggcgcgcaactac
tcggcctacacgctggaggtcaccccgtccaagctgcaggacacgctggacaacaccatc
gaccagctcgcccaggtgatcgacatccagccgcgcgaccgtcgccgcttcaagcgcctg
atggaagacgcgcgcagcttcgagagcctgccgatccgcagccagctgaccgaccaggag
gtggcgcgcttctcggcacagcgcttccgcttcccgggcgtggacgtgcacgctaggctg
ttccgccagtacccgttgggcgaggcggcggcgcacgtgatcggctacatcggccgcatc
tccgagcgcgacctcgagcgcatcgacgacatgagcgaggccaacagccagcccaacgtc
acctacgatccgcgcaaggacgccaacaactacagcggcaccgagtacatcggcaaggtc
ggcatcgagcagagctacgagaccgagctgcacggcctgaccggctacgaagaagtcgag
gtcagcgcgggcgggcggccgatccgcacgctgtccacctcgcaggccacgcccggcaac
aacctgatcctgtcgctcgacatcaacctgcagcggctggccgagcagctgttcggcaac
cgccgcggcgcgctggtggcgatcgagcccgagaccggcgacatcctcgccttcgtctcc
aagcccaccttcgacccgaacctcttcatcgaaggtatcgacagcgccacctggagcgag
ctgaacggctcgcccgacaagccgctgctgaaccgcccgctgcgcggcacgtatccgccg
ggctcgacctacaagccgttcatggcgctggccgcgctggagctgggcaagcgcacgccg
caatggggcatggccgatcccggctcgttcacgctgggcaaccacaccttccgcgacgac
gtgccgggcggccacggctgggtcgacatgtaccgctccatcgtggtgtcgtgcgacacg
tactactacaagctcgccaacgacatgggcgtcaacgccatccacgatttcatgaagccg
ctcggcttcggccaggtcaccggcatcgacatcgagggcgagcgcaccggcatcctgccc
tccaccgagtggaagcgcaaagcctacaagcgtcccgagcagcagaagtggtacgacggc
gaaaccatctcgctgggcatcggccagggctacaacaacttcaccatcctccagctggcg
catgcggtggcgacgctggccaacaacggcggcgtgatgaagccccacctggtcaaggcc
gtcgaggattccgtcaacaaggcccgcacgctgacggtgccgaccgagagctaccggatt
ccgctcaagcaggccaacatcgacgtgatcaagcgcgcgatggccggggtggtccaggcc
ggcacggcggccaaggcgtttgccggcgcgcaatatgccgcggcgggcaagaccggcacg
gcgcaggtgttctcgctcggcaagggcgagaagtacaaccaccatgccattcccgaatac
aagcgcgaccacgcgctgttcgaggccttcgcgccgaccgaccacccgaagatcgcggtg
gcgctgatcgtcgagaacgcgggcttcggcgccacctcggccgcgccgatcgcgcgcgcg
gtgttcgactactacctgcagggcaagtggccggccgagctggcggccatcgcgcccaag
gtccagccgcagccgccggtcgatacgccgagcgtgttctccaccggcaagaccgccacc
atcgccagcgccacggccacgccgcaggcagccgcggaggcggtggcgcagagcgcggcc
ctggccgcggccgcatccggcgagcaggctgccgatgcagccacggtgggcggcgcgtcc
gcgccgggcgcttcggccgtggcggccggcgcaccgcgcgccgcgccggcgatgtcgtcc
gatcgggtcgcgcccgcgctgcgcgaggccggcaccagcgcccaggcggtcgctccggcc
acgctggacgcccaggtgctgcaggcgctgtcgcacgtccagcccgcccccgacctgccg
agcccgcgcggccgcaacctgccggcggcaccggcttccgcgccggccgcctcgcccaag
gaccgcaagcccgcggtcaagcccaatcccaagcctgcgcccaaaccggcacgggccgct
ccctga
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