Ralstonia pseudosolanacearum GMI1000: RSc0088
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Entry
RSc0088 CDS
T00071
Symbol
slt
Name
(GenBank) probable soluble lytic murein transglycosylase precursor transmembrane protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
RSc0088 (slt)
Enzymes [BR:
rso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RSc0088 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RSc0088 (slt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
HEAT_Nup120
Motif
Other DBs
NCBI-ProteinID:
CAD13616
UniProt:
Q8Y392
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All DBs
Position
complement(101627..103579)
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AA seq
650 aa
AA seq
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MTVKGKAVYRAVALAFAGVIGMGAVGPVPLAVAGKRPALQVIPANPDDAFVELRNAARRN
DVARSWELADSLSDYPIPSYVQYFRIKPQLFDASGYARTDAPEDEIRSFLQRYKGEAIAD
RLRNDWLLVLGKKRDWATFDAEYPQFVLKDDTQVECYALLSRAMKGQNVAADARNTLSDP
KGYGEGCVDLIGYLAQSGQLARADVAFAARLSLEQNLITQAARIAAVLPEGDRVDNDTLA
NVTRMARSDPSQATAYLMAQSGGLSKEEQGAGWGVIGQYAAKKQTPDALDAYRRQMTLGG
DAWLSDDSQEWRVRTALRAGDWKMVRQAIDSMRAPLRSRDPAWTYWYGRALKADGRNEDA
KQQFQSIAGQFNFYGQLALEELGQRITVPQRTAVTDAEIDPMGRNHPGFGRAKRLYDLNL
RFEGNREWNWELRNMSDRELLAAAEYGRKLGMLDRTVNSADKTRNEHDFSLRFPMPFRNV
VERNADAVGLDVAWTYGLIRQESRFIMDARSSVGASGLMQVMPETAKRVAKKIGLPVFRP
SQMSDIDTNVLLGTSYLSMILTDLDSSMTLATAGYNAGPGRPKRWRSTLTRPVEGAIFAE
TIPFNETRTYVKNVLSNATYYGALLTGRPQSLKDRLGKVAPEAVTPDDLP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgaagggcaaggcagtatatcgcgcggtggcgctggctttcgcgggcgtgatc
ggcatgggcgcggtggggccggtgcccctggcggtggccggcaagcggccggcgctgcag
gtcattccggccaatccggacgatgccttcgtcgagttgcgcaacgccgcgcgccgcaac
gacgtggcccgcagctgggagctcgcggacagcctgtccgactacccgatcccatcctac
gtccagtatttccgcatcaagccgcagctgttcgacgccagcggctacgcgcgcaccgat
gcgccggaagacgagatccgctcgttcctgcagcgctacaagggcgaggccatcgccgac
cgcctgcgcaacgactggctgctggtgctcggcaagaagcgcgactgggccaccttcgac
gccgaatacccgcagttcgtgctcaaggacgacacccaggtcgagtgctacgcgctgctg
tcgcgcgcaatgaagggccagaacgtggccgccgacgcgcgcaacaccctgtccgatccc
aagggctacggcgagggctgcgtcgacctgatcggttatctcgcccagtccggccagctc
gcgcgtgccgacgtcgccttcgcggcgcggctgtcgctggagcagaacctcatcacgcag
gccgcgcgcatcgccgccgtgctgccggagggcgaccgggtcgacaacgatacgctcgcc
aacgtcacgcgcatggcgcgcagcgacccgtcgcaggccaccgcctacctgatggcgcaa
agcggcggcctgtcgaaggaagagcagggcgcgggctggggcgtgatcggccagtacgcc
gccaagaagcagacgcccgatgcgctcgacgcctaccgccgccagatgacgctgggcggc
gacgcctggctgtcggacgactcgcaggaatggcgcgtgcgcaccgccctgcgcgccggc
gactggaagatggtgcgccaggccatcgattcgatgcgcgcgccgctgcgcagccgcgat
ccggcctggacctactggtacggccgtgcgctcaaggccgacggccgcaacgaggacgcg
aagcagcagttccagtcgatcgccgggcagttcaacttctatggccagttggcgctggaa
gagctcggccagcgcatcaccgtgccgcagcgcacggccgtgaccgatgccgagatcgac
ccgatgggccgcaaccatccgggcttcggccgcgccaagcggctgtatgacctgaacctg
cgtttcgagggcaaccgcgagtggaactgggagctgcgcaacatgagcgaccgcgagctg
ctggcggcggcggagtatggccgcaagctcggcatgctcgaccgcaccgtcaactcggcc
gacaagacccgcaacgagcatgacttctcgctgcgcttcccgatgccgttccgcaacgtg
gtcgagcgcaacgccgatgccgtcggcctggacgtcgcctggacctacggcctgatccgc
caggaatcgcgcttcatcatggacgcgcgctcctcggtgggcgcatcgggcctgatgcag
gtgatgcccgagaccgccaagcgcgtcgccaagaagatcggcctgcccgtcttccgtccc
tcgcagatgagcgacatcgataccaacgtgctgctcggcaccagctacctgtcgatgatc
ctgaccgacctcgacagctcgatgacgctggccaccgccggctacaacgccggccccggc
cggcccaagcgctggcgctccacgctgacgcgcccggtggaaggcgcgatcttcgccgag
accatccccttcaacgagacccgcacctacgtgaagaacgtactgtcgaacgccacctac
tacggtgccctgctgaccggccggccgcaatcgctgaaagaccgcctgggcaaggtcgcg
cccgaggccgtgacgccggacgatctgccgtag
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