Ralstonia pseudosolanacearum GMI1000: RSc0137
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Entry
RSc0137 CDS
T00071
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase (dap epimerase) protein
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00300
Lysine biosynthesis
rso00470
D-Amino acid metabolism
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
rso01120
Microbial metabolism in diverse environments
rso01230
Biosynthesis of amino acids
Module
rso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSc0137 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSc0137 (dapF)
Enzymes [BR:
rso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RSc0137 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAD13665
UniProt:
Q8Y344
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All DBs
Position
159639..160517
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AA seq
292 aa
AA seq
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MKLHFTKMHGAGNDFVVLDGIATPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDF
RYRIFNHDGGEVEQCGNGARCFVKFVTDRGLTDKRTIRVEVMNGISTLTMQPDGQVTVDM
GAPVFEAARLPFVPDALPTRVEGRDTQHALQINGRTAWLSTVSMGNPHAVQVVDDAEAFP
VREDGPLIESHAVFPRRVNAGFMEIADRHAIRLRVYERGAGETLACGTGACAAAVAGIRR
GLLDSPVKVTTHGGDLTIAWAGEGEPVMMTGPATTVFEGTLDLDALKQTAAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcacttcaccaagatgcacggcgccggcaacgacttcgtcgtgctcgacggc
atcgcgaccccgatcgatttcacccccgaacagtggcgcgccatcgccgaccgccacttc
ggcgtgggcgcggaccagctgctgctggtggagcgttccacccgccccgacgtcgatttc
cgctaccgcatcttcaaccacgacggcggcgaggtggagcagtgcggcaacggcgcgcgc
tgcttcgtcaagttcgttaccgaccgtggcctgaccgacaagcgcaccatccgcgtcgaa
gtgatgaacggcatctccacgctgacgatgcagcccgacggccaggtgacggtcgacatg
ggcgccccggtgttcgaggccgcgcgcctgcccttcgtgcccgatgccctgcccacccgc
gtggaaggccgcgacacgcagcacgccctgcagatcaacggccgcaccgcgtggctgtcc
accgtgtcgatgggcaacccgcacgcggtgcaggtggtcgatgacgcggaagccttcccg
gtgcgcgaagacggcccgttgatcgaatcgcacgctgtgttcccgaggcgcgtgaatgcc
ggcttcatggagatcgccgaccgccacgccatccgcctgcgcgtgtacgagcgcggcgcc
ggcgagacgctggcctgtggcacgggcgcctgcgcggcggcggtggcggggatccggcgc
ggcctgctggattcgcccgtcaaggtgaccacgcacggcggcgacctgaccatcgcctgg
gccggcgagggcgagccggtgatgatgaccggcccggccacgaccgtgttcgaaggcacg
ctggacctggacgcactgaagcagaccgccgcgcactga
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