Ralstonia pseudosolanacearum GMI1000: RSc0204
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Entry
RSc0204 CDS
T00071
Symbol
deoA
Name
(GenBank) putative thymidine phosphorylase (tdrpase) protein
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00240
Pyrimidine metabolism
rso01100
Metabolic pathways
rso01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RSc0204 (deoA)
Enzymes [BR:
rso01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
RSc0204 (deoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_trans_3N
PYNP_C
Glycos_transf_3
Motif
Other DBs
NCBI-ProteinID:
CAD13732
UniProt:
Q8Y2X7
LinkDB
All DBs
Position
225922..227445
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AA seq
507 aa
AA seq
DB search
MLAPPEVAALPDRLTFKPLGIDTWQEHVIYMHPDCAICRAEGFTAQARVEVRIGLRSLIA
TLNLVGSGLLEMCEVSLSVSAVETLMARPGDIVTVSHAPALESLRAVRAKIYGAHLDTHQ
LASVVGDIAKERYADVHIAAFLSACAGGRMSVKETIDLTQAMVDSGECLEWDREIVADKH
CVGGLPGNRTSPIVVAIAAAAGLLLPKTSSRAITSPAGTADTMETLTRVALSATELRRVV
DRVGASLAWGGALSLSPADDVLIRVERALDVDSDAQLAASILSKKIAAGSTHVLIDVPVG
PTAKVRSLQDLERLRMLLERVARSFGVRVTIVRTDGSQPVGRGIGPALEARDVLAVLQRS
PAAPFDLRERSLLLAATLLEFCGAVEQGAGLEMATGVLDSGAAWRKFEEICEAQGGLRVP
GEAIFRRDVVAEQDGIVTEIDNRHLARIAKLAGAPMRQVAGVEMHVRLHDQVKAGRPLFT
IHAQASGELEYSVAYALMHPAVSIAPT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctccgcctgaggtggcagcactgcccgatcggcttaccttcaagccgttgggc
atcgacacttggcaggagcacgtcatctacatgcatccggattgcgcaatctgccgggct
gaggggttcactgcacaagctcgggtggaggtgcggatcggtctgcgctccttgattgcc
acactcaatctcgtcggctcaggcttgctggagatgtgtgaggtcagcttgtccgtcagc
gccgtcgagacgctgatggcgaggcccggcgatattgtgactgtcagtcacgcgcccgcg
ctggagtcgctgcgggcggtacgcgccaagatctatggggcgcatctggatacgcatcaa
ctggctagcgtcgtcggtgatattgccaaagagcggtatgccgacgtccacattgcggcg
ttcctgagcgcctgcgcaggcgggcgaatgagcgtcaaggagacaatcgatctcacccag
gccatggtcgactcgggcgaatgtctcgaatgggatcgcgagatcgtcgcggacaagcac
tgtgtgggcggcttgccgggcaaccgtaccagtcccatcgtggtcgccatcgctgccgct
gcaggcttgttgctacctaagacctcgtcgcgcgccatcacgtcacccgccggtaccgcc
gacacgatggagacactcacgcgtgttgctctgagcgccacggagttgcgacgcgtcgtt
gatcgggttggagcttcgctcgcgtggggcggtgcgctcagccttagccccgccgacgac
gtgctcattcgcgtggagcgggcgttggatgtggatagcgatgcccaacttgcggcctcc
attctgtcgaagaagatcgcggccgggtcaacccatgtcttgatcgacgtgcccgtgggg
ccgacggccaaggtgcgcagtctgcaggatttggagcgcctgcgtatgctgctcgagcgc
gtagcgcggtcgttcggcgtgcgcgtcacgatcgtgcgcacggacggctcgcagccggtt
ggcaggggaattggtccggcgcttgaagcacgagacgtcttggccgtgcttcaacgctct
cctgcggcgccgttcgacctgcgggagcggtcgttgttgctggctgcgactctgctagag
ttttgtggggcggtggagcagggggcagggcttgagatggccacaggcgtgctggacagt
ggtgcggcgtggcggaagttcgaggaaatctgcgaagcgcagggaggcctgcgtgtgcca
ggtgaggccatcttccgtcgtgatgtggtagctgagcaagacggcatcgtcaccgagatc
gacaaccgacatcttgctcgtatcgcgaaactcgcgggggctccgatgcgccaagtggca
ggcgtggagatgcacgtgagactacacgaccaggttaaggcggggcggcctctctttacc
atccatgcccaggcttcaggtgaactggaatattccgtagcttatgcactgatgcaccca
gcggtttccatcgccccgacttga
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