Ralstonia pseudosolanacearum GMI1000: RSc0374
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Entry
RSc0374 CDS
T00071
Symbol
rpoH
Name
(GenBank) probable rna polymerase sigma h (sigma-32) factor transcription regulator protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rso03021
]
RSc0374 (rpoH)
Transcription machinery [BR:
rso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSc0374 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TPR_4
DUF733
Motif
Other DBs
NCBI-ProteinID:
CAD13902
UniProt:
Q8Y2G2
LinkDB
All DBs
Position
complement(401283..402203)
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AA seq
306 aa
AA seq
DB search
MNAVIPVNTVSAVATQPSSNAWALAFPGSLGNLDAYIQSVNRVPMLTAEEEQQLARDYHA
TGNLDAARRLVLSHLRLVVSIARQYLGYGLPHADLIQEGNVGLMKAVKRFDPDQGVRLVS
YAIHWIKAEMHEYILKNWRMVKVATTKAQRKLFFNLRSHKQDAHATFTSDEVDAVAQELN
VKGAEVREMETRLSGGDIALEGQIDDGEESFAPIAYLADTHNEPTRVLEGRGRDRLQSEG
IETALAKLDDRSRRIIEARWLHVNDDGSGGATLHELADEFGVSAERIRQIESAAMKKMKG
ALQSFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcagtcattcccgtgaacaccgtttccgccgtcgccacgcagccgtcgtccaat
gcctgggcgctagcctttcccggcagcctgggcaaccttgacgcctatatccagagcgtc
aaccgcgtgccgatgctcacggccgaagaagaacaacagctggcccgcgactatcacgcg
accggcaacctcgacgccgcgcgccggctggtgctatcgcacctgcgcctggtggtgtcg
atcgcccgccagtacctcggctatggcctgccgcatgccgacctgatccaggaaggcaac
gtcggcctgatgaaggccgtcaagcgcttcgacccggaccagggcgtgcggctggtgtcg
tacgcgatccactggatcaaggccgagatgcacgagtacatcctgaagaactggcgcatg
gtcaaggtggcgaccaccaaggcccagcgcaagctgttcttcaacctgcgcagccacaag
caggacgcccacgccaccttcacgtccgacgaagtcgatgcggtggcgcaagagctgaac
gtcaagggtgccgaggtgcgcgagatggaaacgcgcctgtccggcggcgacatcgcgctg
gagggccagatcgacgacggcgaagagtcgttcgccccgatcgcctacctggccgatacg
cacaacgagcccacccgcgtgctggaagggcgcggccgcgaccgcttgcagagcgagggc
atcgaaaccgccctggccaagctggacgaccgcagccgccgcatcatcgaggcgcgctgg
ctccacgtcaacgacgacggctcgggcggcgccacgctgcatgaactggccgacgagttc
ggcgtgtcggccgagcgcatccgccagatcgaatcggccgcgatgaagaagatgaagggc
gcgctgcagtcttttgcctga
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