Ralstonia pseudosolanacearum GMI1000: RSc0412
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Entry
RSc0412 CDS
T00071
Symbol
yrbI
Name
(GenBank) probable 3-deoxy-d-manno-octulosonate 8-phosphate(kdo 8-p)phosphatase protein
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00541
Biosynthesis of various nucleotide sugars
rso01100
Metabolic pathways
rso01250
Biosynthesis of nucleotide sugars
Module
rso_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RSc0412 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc0412 (yrbI)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
RSc0412 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
Lipid A
RSc0412 (yrbI)
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Paralog
GFIT
Motif
Pfam:
Hydrolase
Hydrolase_3
Motif
Other DBs
NCBI-ProteinID:
CAD13940
UniProt:
Q8Y2C4
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All DBs
Position
complement(439256..439843)
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AA seq
195 aa
AA seq
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MSSPADSPVHSNIEARFPQAMERAARVRLMIFDVDGVLTDGRLLVGPQGEISKAFDTLDG
HGIKLLAQAGITPAIITGRESEIVAWRAGELGIEHLYQGVADKREAFVHLLAATALQPAD
AGYMGDDWPDLPVMAQVGFAACPAQAHAEVRSRCHYVTRAKGGRGAAREVADLILKAQGA
YDDLLAQLLQAPNAP
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcccggccgattcccccgtccacagcaacatcgaggcacgcttcccgcaggca
atggagcgcgccgcccgcgtgcgcctgatgatcttcgacgtggacggcgtgctgaccgac
ggccgcctgctggtcggcccgcagggcgagatcagcaaggccttcgatacgctggacggc
cacggcatcaagctgctggcccaggcgggcattacgccggccatcatcaccgggcgcgaa
tccgagatcgtggcctggcgcgccggggaactcggcatcgaacatctgtaccaaggtgtg
gccgacaagcgcgaggccttcgtccacctgcttgccgccacagcgctgcagcccgccgac
gccggctacatgggcgacgactggcccgacctgccggtcatggcgcaggtcggctttgcc
gcctgccccgcccaggcccacgccgaggtgcgcagccgctgccactatgtgacccgggcc
aagggcggtcgcggcgcggcgcgtgaagtcgccgacctgatcctcaaggcccagggcgcc
tacgacgacctgctcgcgcaactgctgcaagcgcccaacgccccctga
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