Ralstonia pseudosolanacearum GMI1000: RSc0500
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Entry
RSc0500 CDS
T00071
Symbol
ruvB
Name
(GenBank) probable holliday junction dna helicase ruvb protein
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RSc0500 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc0500 (ruvB)
Enzymes [BR:
rso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSc0500 (ruvB)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RSc0500 (ruvB)
RecFOR pathway proteins
RSc0500 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
nSTAND3
AAA_22
Rad17
AAA_14
AAA_18
RNA_helicase
TsaE
NTPase_1
AAA_33
AAA_17
Bac_DnaA
Sigma54_activ_2
DUF815
AAA_28
ABC_tran
NB-ARC
bpMoxR
IstB_IS21
NACHT
AAA_24
AAA_25
Zeta_toxin
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
CAD14028
UniProt:
Q8Y236
LinkDB
All DBs
Position
complement(534251..535324)
Genome browser
AA seq
357 aa
AA seq
DB search
MIETDKLAAKAVSAERLISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAK
KRREALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDV
LFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVARLEFYTPTELARIVTRSAGLLDARIAEDGALEIAKRSRGTPRIANRLLRR
VRDYAEVKADGVITRAVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAA
IGEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKTGPARDLWDNNA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaagctcgccgccaaggccgtctccgctgaacgcctgatctcggcc
tcgcccgcctcccccaacgaggaggcattcgagcgcgcgctgcgccccaagctgctcgac
gaatacgtcggccaggaaaaggtgcgcggccagctcgatatcttcatgacggcggccaag
aagcgccgcgaggcgctcgaccacgtgctgctgttcggcccgccgggcctgggcaagacg
acgctggcgcacatcatcgcccgcgagatgggcgtcaacctgcgccagacctcgggcccc
gtgctggagcgcccgggcgacctggccgcgctgctgaccaacctcgaagccaacgacgtc
ctcttcatcgacgagatccatcgactctcgccggtggtggaggaaatcctgtatccggcg
ctcgaggactaccagatcgacatcatgatcggcgaaggcccggcagcccgctcggtcaag
ctcgatctgcagccgttcacgctggtgggcgccaccacgcgcgccggcatgctgaccaac
ccgctgcgcgaccgcttcggcatcgtcgcccggctcgagttctatacgccgacggagctc
gcgcgcatcgtcacgcgctcggccggcctgctcgacgcgcgcatcgccgaagacggcgcg
ctggagatcgccaagcgctcgcgcggcacgccccgcatcgccaaccgcctgctgcgccgc
gtgcgcgactacgctgaagtgaaagccgacggcgtcatcacccgcgcggtggccgacgcg
gcgctggcgatgctcgacgtggatgcggtcggcttcgacctgatggaccgcaagctgctg
gaagccatcctgcacaagttcaacggcggcccggtcggcatcgacaacctggccgccgcc
atcggcgaggagcgcgacaccatcgaagacgtgctcgagccctacctgatccagcagggc
tacctgcagcgcacgccgcgcgggcgcgtcgccacggcatcggcctaccagcacttcggg
ctgggcgcgccgaagaccggtccggcgcgcgacctgtgggacaacaacgcctag
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