Ralstonia pseudosolanacearum GMI1000: RSc0565
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Entry
RSc0565 CDS
T00071
Symbol
rfaF
Name
(GenBank) probable adp-heptose--lipopolysaccharide heptosyltransferase II protein
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00540
Lipopolysaccharide biosynthesis
rso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RSc0565 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc0565 (rfaF)
Enzymes [BR:
rso01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
RSc0565 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
Core region
RSc0565 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
DUF6403
Motif
Other DBs
NCBI-ProteinID:
CAD14095
UniProt:
Q8Y1X2
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All DBs
Position
complement(609776..610801)
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AA seq
341 aa
AA seq
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MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTE
LAHGKLQLGSRTMFAQQLKGESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLN
VRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRVDLPRVAATSAKFGIPGNARL
IAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIM
WLHLECSPCFARECPLGHLRCLRDIGPEMVFHELRRLLQPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcaagatcctggtcgtcgcccccaactggatcggcgacgcgctgatggcgcag
ccgctgttcgcgcagatcaaggcgcggcatccgcgcgcgcagatccatgccatcgccccg
aagtgggtggcgccggtgctcgcgcgcatgcccgagatcacgcgcgtgctgccgactgaa
ctggcgcacggcaagctgcagctcggcagccgcacgatgttcgcccagcagctcaagggg
gaatcgttcgatgccgcctatgtgctgccgaactcgttcaagagcgcgctgatcccgtgg
ctggccggcattccgctgcgcatcggctacaagggcgaatcgcggctgggcgtgctcaac
gtgcgctacccgaacccgcccaagcgcgaacggccgccgatggtgcagcactatgcggcg
ctggccttcaagcccggcgccaagctgcccgagaccctgcccgacccgcagctgcgggtg
gacctgccgcgcgtggccgccacctcggccaagttcggcattcccggcaacgcccggctg
atcgccttctgcccgggcgcggaatacggcaccgccaagcgctggcccgccgagcacttc
gccgagctggcgcagatgctgcggcgctcgttcccgtacgcgcacatcgtcacgctcggc
tcggccaaggatcgcgagaccgccgacgccatcgccgagcgcgcgcctttcgtgcgcaac
ctgtgcggcgagacctcgctggacgaggccatcgagctgctcgcccgcgccgaggccgcc
atctgcaacgactcgggcctgatgcacgtcacggctgccctggggcgcccgcaggtggcc
gtgttcggctcgagcgacccgcgccacacgccgccgctgtcacccgctgcgagtatcatg
tggctccatctcgaatgcagcccgtgcttcgcccgcgaatgcccgctcggccatctgcgc
tgcctgcgcgacatcggtcccgagatggtgtttcatgaattgcgccggctgctgcagccg
gtgtaa
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