Ralstonia pseudosolanacearum GMI1000: RSc0642
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Entry
RSc0642 CDS
T00071
Symbol
mopA
Name
(GenBank) probable 60 kda chaperonin (protein cpn60) (groel protein).
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSc0642 (mopA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rso03019
]
RSc0642 (mopA)
03110 Chaperones and folding catalysts [BR:
rso03110
]
RSc0642 (mopA)
03029 Mitochondrial biogenesis [BR:
rso03029
]
RSc0642 (mopA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rso04147
]
RSc0642 (mopA)
Enzymes [BR:
rso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RSc0642 (mopA)
Messenger RNA biogenesis [BR:
rso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSc0642 (mopA)
Chaperones and folding catalysts [BR:
rso03110
]
Heat shock proteins
HSP60 / Chaperonin
RSc0642 (mopA)
Mitochondrial biogenesis [BR:
rso03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RSc0642 (mopA)
Exosome [BR:
rso04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSc0642 (mopA)
Exosomal proteins of other body fluids (saliva and urine)
RSc0642 (mopA)
Exosomal proteins of breast cancer cells
RSc0642 (mopA)
Exosomal proteins of colorectal cancer cells
RSc0642 (mopA)
Exosomal proteins of bladder cancer cells
RSc0642 (mopA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAD14172
UniProt:
Q8Y1P8
LinkDB
All DBs
Position
688909..690552
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVAAGMNPMDLKRGI
DKAVAAAVEELKKISKPTTTSKEIAQVGAISANSDESIGARIAEAMDKVGKEGVITVEDG
KSLEDELDVVEGMQFDRGYLSPYFINNPEKQVVQLDNPFVLLFDKKISNIRDLLPVLEQV
AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLNDLGQAKRVEIGKENTTIIDGAGDARNIEARVKQVRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARALISGLKGANADQDAGIKIVLRAMEEPLRQIVTNAGDEASVVVANVIAGKGNYGYNA
STGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAELPKDDAAPAMPGGMGGM
GGMDGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtagtgttcggcgatgccgcacgcgccaagatggtcgagggcgtc
aacatcctcgccaacgccgtgaaggtgaccctgggcccgaagggccgcaacgtggtgctg
gagcgcagcttcggtggcccgaccgtgaccaaggacggcgtgtcggtcgccaaggaaatc
gagctgaaggacaagctgcagaacatgggcgcgcagatggtcaaggaagtggcttccaag
accagcgacaacgccggtgacggcaccaccaccgccacggtgctggcccagtcgatcgtg
cgcgaaggcatgaagtacgtggccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtcgccgctgccgtcgaagagctgaagaagatcagcaagccgactaccacc
agcaaggaaatcgcccaggttggagccatctcggccaacagcgacgagtcgatcggcgcg
cgcatcgctgaagcgatggacaaggtgggcaaggaaggcgtgatcaccgtggaagacggc
aagtcgctggaagacgagctggacgtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaacccggaaaagcaggttgttcagctggacaacccgttcgtg
ctgctgttcgacaagaagatcagcaacatccgcgacctgctgccggtgctggagcaagtg
gccaaggccggccgtccgctgctgatcgtcgctgaagatgtcgaaggcgaagccctggca
acgctggtggtcaacaacatccgtggcatcctgaagaccgccgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgctgaagaagtcggcctgacgctggaaaaggcgaccctgaacgatctgggccaagcc
aagcgtgtggaaatcggcaaggaaaacaccacgatcatcgatggcgccggcgatgcccgc
aacatcgaagcgcgcgtcaagcaagtgcgcgcccagatcgaggaagccacgtcggactac
gaccgtgagaagctgcaagagcgcgtggccaagctggccggcggcgtggcagtgatcaag
gttggtgcggccaccgaagtcgaaatgaaggaaaagaaggcccgcgtggaagacgccctg
cacgctacccgcgctgccgtggaagaaggcatcgtggctggcggcggcgttgcgctgctg
cgtgcccgtgcgctgatctccggcctgaagggtgccaacgctgaccaggacgccggcatc
aagatcgtgctgcgcgccatggaagagccgctgcgccagatcgtcacgaacgctggcgac
gaggcttcggtggtggtggccaacgtcatcgcaggcaagggcaactacggctacaacgcc
tccaccggcgagtacggtgacctggtggaaatgggcgtgctggacccgaccaaggtgacc
cgcaccgcgctgcagaacgccgcttcggtcgcatcgctgatgctgacgacggactgcgcc
gtggccgaactgccgaaggacgatgcagctccggcaatgccgggcggcatgggtggcatg
ggcggcatggacggcatgatgtaa
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