Ralstonia pseudosolanacearum GMI1000: RSc0687
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Entry
RSc0687 CDS
T00071
Symbol
rfbF
Name
(GenBank) probable dtdp-rhamnosyl transferase rfbf protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSc0687 (rfbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc0687 (rfbF)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
O-antigen repeat unit
RSc0687 (rfbF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
CAD14217
UniProt:
Q8Y1K3
LinkDB
All DBs
Position
735017..735946
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AA seq
309 aa
AA seq
DB search
MLKSGAIFVTFRPTDEQVAAIAATARLFDAVIVVDNSPAPDAALRHRFSLPNVQFLENAN
RGGIAGAFNRGVEALLASGIDRVYFFDQDSAVPADYRQLMDEALDGAPEACMIGPKIYDI
NLRAFSPRYLVSRWTYRADPIPESANALIPCSFLISSGSVATRAALTACGPFREDYFIDD
VDTEYCLRAAQLGVGVFINPRAVLNHAIGEREEHRFLGVRIRPSHHGALRRYYRCRNGIS
LSLRHARHSPAFLIHNQKRLAHEIIGVLLYERRKWKKLTAIGVGIIHGVMSRLGDLREIA
PRFHQWLVG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaggtgcaattttcgtcacgttccgtccgacggacgagcaggtcgctgcg
atcgccgccacggcgcggctgttcgacgccgtgatcgtggtcgacaactcgccggcgccg
gacgcggccctgcgtcaccgcttcagtctgccgaacgtccagtttctggagaacgcaaac
cgtggcgggatcgcgggggcgttcaatcgcggtgtcgaggcgctgctggcgagcggaatc
gaccgggtctacttcttcgaccaggattcggcggttccggccgactatcgccagctcatg
gacgaggcgctggacggcgcgcccgaggcctgcatgatcgggcccaagatctatgacatc
aacctgcgcgcattctcgccgcgctacctggtgtcacgctggacgtatcgcgcggatccc
atccccgagtcggccaacgcgctgataccgtgctcgttcctgatttcgagcggctcggtg
gccacccgggcggcgttgacggcgtgcggtccgttccgggaagactatttcatcgacgat
gtcgatacagagtactgcctgcgcgcggcccagctgggcgtcggcgtgttcatcaacccg
cgcgccgtgctgaaccacgcgatcggcgagcgcgaagagcaccggttcctgggcgtgcgg
atccggccgagccatcatggcgcattgcgcaggtactaccgttgccggaacggcatcagc
ctcagcctgcggcatgcgcggcattcgcccgcgtttctgatacataaccagaagcggctg
gcgcacgagatcatcggtgtgctgctctatgagcggcggaagtggaagaaattgacggcg
atcggggtcggcatcatccacggcgtgatgagccggctgggcgatctccgggaaatcgcc
ccgcggttccatcaatggctggtgggctga
DBGET
integrated database retrieval system
