Ralstonia pseudosolanacearum GMI1000: RSc0729
Help
Entry
RSc0729 CDS
T00071
Symbol
glyA1
Name
(GenBank) probable serine hydroxymethyltransferase 1 (serine methylase 1)(shmt 1) protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00260
Glycine, serine and threonine metabolism
rso00460
Cyanoamino acid metabolism
rso00630
Glyoxylate and dicarboxylate metabolism
rso00670
One carbon pool by folate
rso00680
Methane metabolism
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
rso01120
Microbial metabolism in diverse environments
rso01200
Carbon metabolism
rso01230
Biosynthesis of amino acids
rso01240
Biosynthesis of cofactors
rso04981
Folate transport and metabolism
Module
rso_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RSc0729 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
RSc0729 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSc0729 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RSc0729 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RSc0729 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RSc0729 (glyA1)
Enzymes [BR:
rso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RSc0729 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAD14259
UniProt:
Q8Y1G1
LinkDB
All DBs
Position
complement(776547..777794)
Genome browser
AA seq
415 aa
AA seq
DB search
MFERNRYTIDQIDPEVFAAIQQENQRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAEGGHLTHGMALNMSGKWFNVVSYGLNAQEDIDYDALEALAQEKKPKLIIAGASAFAL
RIDFERIAKVAKAVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEAQSPTFKAYQEQVVKNARAMAETL
MARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFKEGEAVKVAHLIADVLDNPHDEANIAAVRAKVAELTKQFPVYA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgcaaccgctatacgatcgaccagatcgacccagaagtcttcgccgccatc
cagcaggaaaaccagcgccaggaagaccacatcgagctgatcgcctccgagaactacacc
tcgccggccgtgatggccgcccagggctcgcagctgaccaacaagtatgccgagggctat
cccggcaagcgctactacggtggctgcgaatacgtggacgtggtcgagcagctcgccatc
gaccgcgtgaagcaactgttcggcgccgaggccgccaacgtgcagccgaactccggctcg
caggccaaccagggcgtgttcttcgccatgctcaagccgggcgacaccatcatgggcatg
agcctggccgaaggcggccacctgacgcacggcatggcgctcaacatgagcggcaagtgg
ttcaacgtcgtcagctacggcctgaacgcgcaggaagacatcgactacgatgccctcgaa
gcgctggcacaagagaagaagcccaagctgatcatcgccggcgcctccgcgtttgcgctg
cgcatcgacttcgagcgcatcgccaaggtggccaaggccgtcggcgcgtacttcatggtt
gacatggcccactacgccggcctgatcgccgcgggcgtctacccgaacccggtgccgcac
gccgatttcgtgaccaccaccacccacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagcacgagaaggccatcaactcggcgatcttccccggcatccagggc
ggcccgctgatgcacgtgatcgccggcaaggcggtggcgttcaaggaagcccagtcgccc
acgttcaaggcctaccaggaacaggtggtgaaaaacgcccgcgccatggccgaaacgctg
atggcccgcggcctgcgcatcgtctccggccgcaccgaaagccacgtgatgctggtcgac
ctgcgcgcgaagagcattaccggcaaggaagccgagaaggtgctgggcgacgcgcatatc
accgtcaacaaaaacgccatcccgaacgatccggagaagcccttcgtgacctcgggcatc
cgcctgggctcgccggccatgaccacgcgaggcttcaaggagggtgaggccgtgaaggta
gcccacctgatcgccgatgtgcttgataatccgcatgacgaagccaacatcgcggccgtg
cgcgccaaggtggccgagctgaccaagcagttcccggtctacgcatga
DBGET
integrated database retrieval system
