Ralstonia pseudosolanacearum GMI1000: RSc0873
Help
Entry
RSc0873 CDS
T00071
Name
(GenBank) putative bacteriophage-related transmembrane protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_3
RIG-I_C
Phage_Gp84
CoV_S2
Motif
Other DBs
NCBI-ProteinID:
CAD14575
UniProt:
Q8Y120
LinkDB
All DBs
Position
905209..909309
Genome browser
AA seq
1366 aa
AA seq
DB search
MSQRISILVALDGADEGLKRAITSAERSLGELAASAKTSGDKAAAGLAQVKAGVSVIGEQ
VTAARTQVLAFLSINWAAGKVQEIVQVADAWNMMAARLKLATAGQREFTAAQTALFDIAQ
RIGVPIQETATLYGKLQQAVRMLGGEQQQALTITESISQALRISGASANETQSALLQFGQ
ALAAGVLRGEEFNSVVENSPRLAQALADGLNVPIGRLRKMAEEGRLTADVVVNALLSQKS
KLATEYAQLPATVSQAFERLRNAFGQYINRIDQATGFSAKLSEALTWLAQNLDTVMRWLT
RIAEVGLAVLVYRLIPALITAWQTAGAAAVTAASATSAAWATANLSVSAAIASVGMLRTG
FATLGAFLVGWEIGTWLSEKFETVRRAGILMVEVLIRSVEELRFHWEVFAAIFTSDTIAE
ATQRHQARLGDMNRIFAQMVADAGRGTDAAKGAMNAAAGAAEEIAKRLEAVRQGTQEAVG
RGAEAVHTALEKLKSRIGEVEQAVSKASSTVNDATARMAEAYKGLTSIIDGHLQRQVEAV
KARYQQELSALERSGQAQAVQIATSTQLLVGALTQQTALRQQAATEALKLIDDESRARVD
AVAREGKTEAERAANVQRVENEILATRRQTLTQAASEYRQHIDALNAEANRHLTEIRRIE
DEKRQLSMSTEERIRDIRRAGLSDYEAQEDRKRQIAEYQASARAALADGEFDQARQRASK
AMDLAAQVASAQSGEAKRAEDARKQSEAAVTQVAQLEAQAREATGRREYAQAEALTRQAD
ELRARSAQQAANADAQAVRGKAAVNEAIGRIRDSQAILNQTLDAEAQAHQRAAQSAVSAR
QDIQQTLAQTDSQIAQLTAKLQQGLKVTIDADTQRFDKAIADLDKALVERERLVVIKADL
EQAEKTLQDYEQRLKEGRTLPVDADVSKALASLDKLNAYARENSQLELRVATEKARAAIA
NVDSMLRALDRVQTESRHRVASNVDAVRVEVQSLNGMNTSSTHTIAVRRVEANAAGGVVG
GGVQQFAEGGQVAPAFPRMTGGSVPGTGDQDTVPRTLDAGAFVIRKAAVRKYGAGTLAQL
ANGVARFATGGAVLFGGRGGGQPGGGKRNRDVVEARKMIDLGLQGMGDYASWAQHQGGAW
VSSDMRSRTMTNYGRQAERDRQSLDALAERKQLTTAERQTLERIKTTWRQAMAQPMLWGK
DLERDLLDYMEQYQGEFYRDGGVAPSDTVPAMLTPGEYVVNRQAVERHGVAFFDAINNLA
LPARALASTVRGYATGGLVQPLAGMAARASQAVSGAWKGADPAAALSQVLATSMRAPVPA
YAAEVAPARTIRVELASGGRTVAATIDARDEARLLELLKEAQSRAL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacgcatctccattcttgtcgccctcgatggtgccgacgagggcctcaaacgc
gctatcacatcggccgagcgcagcttgggagaactggcagcatccgccaagacatcaggc
gacaaggccgcggcgggcctcgcccaggtcaaggcgggagtgtccgtcatcggcgaacag
gtcaccgcagccaggacccaggtgctggcttttctgtcgatcaactgggccgccggcaag
gtgcaggagatcgtgcaggtcgccgacgcttggaacatgatggccgcgcgcctcaagctt
gctaccgccggccagcgcgaattcaccgccgcgcagaccgcactgttcgatattgctcag
cgcatcggcgtgccgattcaggagaccgccacgctgtacggcaagttgcagcaggcggtg
cgcatgctcggcggcgagcagcagcaggcgctcaccatcacggagagcatctcgcaggcg
ctgcgcatctccggcgcctcggccaacgagacgcaatcggcgctgctgcagttcggccag
gcactggcggcaggcgtgttgcgcggcgaggagttcaactccgttgtcgagaacagcccc
cgcctcgcacaggccctggccgatggcctcaacgttccgatcggccggctgcgcaagatg
gccgaggaggggcggctgacggccgatgtagtcgtcaatgcgctgctgtcccagaagagc
aagctcgccaccgaatacgcccagctgccggcaaccgtcagccaggcgttcgagcggttg
cgcaatgcgttcgggcagtacatcaaccggatcgaccaggccaccggcttcagtgccaag
ctgtccgaggcactgacgtggctcgcgcagaacctcgacacggtgatgcgctggctcacg
cgcatcgccgaagtcgggctggcggtgctcgtctaccggctgatccctgcgctgatcact
gcgtggcagactgcaggcgccgctgccgtcaccgcagccagtgctacctccgccgcctgg
gcgaccgccaacctgtcggtgtcggctgccattgccagcgtgggcatgctcaggaccggt
ttcgccacgctgggcgcgttcctcgtcggctgggagatcggcacctggttgtcggagaag
ttcgagaccgtgcgtcgcgccggcatcctcatggtcgaggtgctgatccggtcggtcgag
gagctgcgctttcactgggaggtgttcgccgccatcttcacgtccgacaccatcgccgag
gcgacccagcggcaccaggcgcggctgggcgacatgaaccggattttcgcgcagatggtt
gccgacgccggccgggggaccgacgcggccaagggcgcgatgaacgcggcagccggtgcc
gccgaggagatcgccaagcgcctggaggcggtgcgccagggcacgcaggaggcggtgggc
cgcggcgccgaggcggtccacacggccctggagaaactcaagtcgcggatcggcgaggtc
gagcaggcggtttccaaggcgagctccacggtgaacgacgccaccgccaggatggccgag
gcgtacaaggggctcacctccatcatcgatggccacctgcagcgccaggtcgaggcggtc
aaggcgcgctaccagcaggaactgtcggcgctggagcgctcgggccaggcgcaggcggtg
cagatcgccacatcgacccaactgctggtcggggccctcacgcagcagacggcgttgcgc
cagcaggccgcgaccgaggcgttgaagctgatcgatgacgagtcccgcgcccgcgtcgat
gccgtggctcgcgaaggcaagaccgaggccgagcgcgcagccaacgtgcagcgggtcgag
aacgagattctggccacccggcggcagacactgacccaggcggcctccgaataccgccag
cacatcgacgcactcaacgccgaggccaatcggcacctgaccgagatccggcgcattgag
gacgagaagcggcagctgtcgatgtcgaccgaggagcgcatccgcgacattcgccgcgcg
gggctatcggactacgaggcccaggaggaccgcaagcgccagatcgctgagtaccaagcc
agtgctcgtgccgcattggccgacggtgagttcgaccaggcccgccagcgcgccagcaag
gccatggacttggccgcccaggtcgccagcgcacagtccggcgaggccaagcgtgccgag
gacgcacgcaagcagtcggaagcggcggtgacgcaggtggctcagctggaagcccaggct
cgggaggcaaccggccgccgggagtatgcgcaggccgaagccctgacacggcaggcggac
gagctgcgcgcccgatcagcacagcaggcggcgaacgccgacgcccaggcggtgcggggc
aaggccgctgtcaacgaagccatcggccgcatccgcgattcgcaggcgatcctcaatcaa
acactggatgcggaggcccaggcgcaccagcgcgccgcgcagtcggcggtatcggcccgg
caggacatccagcaaacgctggcccagaccgacagccagatcgcccagctgacggccaag
ctgcagcaggggctcaaggtcaccatcgatgcggacactcagcgcttcgacaaggccatc
gccgacctcgacaaggcactggtcgagcgcgagcggttggtggtcatcaaggcggatctg
gagcaggccgagaagacgctgcaggactacgagcagcggctcaaggaaggcaggaccctg
ccggtcgatgccgacgtgtccaaggcactcgcctcgctggacaagctcaacgcctacgcc
cgagagaattcacagctggagctgcgcgtcgccaccgagaaggcgcgtgctgcgatcgcc
aacgtcgacagcatgttgcgggcactggaccgcgtgcagaccgagtcgcgccaccgtgtc
gccagcaatgtcgatgcggtgcgcgtcgaggtgcagagtctgaatggcatgaatacgtcc
agcacgcacaccattgccgtgcgccgggtggaggcgaatgccgcaggcggtgtggtcggc
ggcggcgtgcagcagttcgccgagggcggacaggtcgcgcccgcctttccgcgcatgacc
ggcggttcggtgccaggcacgggcgaccaggacacggtgccgcgcacgctggacgccggc
gccttcgtgatccgcaaggccgccgtgcgcaagtacggcgccgggacgctggcgcagcta
gccaacggcgtggcgcgcttcgccaccggcggggcggtgctgttcgggggacggggtggc
ggccagccgggcggaggcaagcgcaatcgcgacgtggtcgaggcccgcaagatgatcgac
ctcggcctgcagggcatgggcgactacgcctcctgggcgcagcaccagggcggcgcctgg
gtcagttcggacatgcgctcgcgcacgatgacgaactatggccggcaggccgagcgtgac
cggcagtcgctcgatgcgctggccgagcgcaagcagctgaccaccgccgagcggcagacg
ctggagcggatcaagacgacctggcgccaggccatggcccagccgatgctgtggggcaag
gatttggagcgcgacctgctcgactacatggagcagtaccagggcgagttctatcgggac
ggcggcgtggcaccttccgacacggtgcccgccatgctgacgcccggcgagtacgtggtg
aaccggcaggcggtggagcgccacggcgtggccttcttcgatgccatcaacaacctggcg
ctgccggcgcgcgcgctggcgagcacagtccggggctacgccaccggcgggctcgtccag
ccgctggcggggatggcagcccgggcgtcgcaagcggtgtctggtgcctggaaaggggcg
gatcctgcggcggcgctgtcgcaggtgctggccacctccatgcgtgcgccggtgcccgcc
tacgcggcagaggtggcgccggcccgcaccatccgtgtggaactggcctccggcggccgg
acggtcgccgccaccatcgatgcccgcgatgaagcgcggctactcgaacttctcaaagaa
gcccaatcccgggcgctgtaa
DBGET
integrated database retrieval system
