Ralstonia pseudosolanacearum GMI1000: RSc0901
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Entry
RSc0901 CDS
T00071
Symbol
gyrA
Name
(GenBank) probable dna gyrase (subunit a)(type II topoisomerase) protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rso03032
]
RSc0901 (gyrA)
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc0901 (gyrA)
Enzymes [BR:
rso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RSc0901 (gyrA)
DNA replication proteins [BR:
rso03032
]
Prokaryotic type
DNA Topoisomerases
RSc0901 (gyrA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RSc0901 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAD14603
UniProt:
Q8Y0Z2
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Position
950444..953101
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AA seq
885 aa
AA seq
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MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT
NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE
VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRNWDSGLV
REMLSRAESDTVGGRAAYRPEGLLPVFGMQEGGLYKLSDTQAQEILQMRLQRLTGLEQDK
IVQEYREVMAQIADLLDILARPERITAIIVEELTLIRAEFGDERRSQIEHNATELDTEDL
ITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPVKQFDEQHFVFMATSKG
TVKKTALTEFSNPRKAGIIAVDLDDGDFLIGADITDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKRTPISEYTR
HGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREMGRATQGVT
LIAVGEGNKLSGLQRVVESDAEGEDAADGGPESDGEAPDADTAET
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagacactcccggtatcgctcgaagaagaaatgcgcagttca
tacctcgcttacgccatgagcgtaatcgtgggccgcgcgcttccggacgtgcgggatggt
ctcaagccggtgcatcgccgcgtgctgtacgcgatgcacgagctgaacaacgactggaac
cgtccctacaagaagtcggcacgtatcgtcggtgacgtgatcggtaagtaccacccgcac
ggcgactccgcggtctatgacaccatcgtgcggatggcacaggatttctcgctgcgctac
atgctggtcgacggccagggcaacttcggctcggtcgacggcgacaacgcggcggcgatg
cgttacacggaaatccgcctgtcgaagatcgcccacgagctgctggccgacatcgacaag
gaaaccgtcgatttcgagccgaactacgacggcagcgaaaccgagccgtccatcctgccc
gcgcgcattccgaacttgctgatcaacggctcgtccgggatcgcggtcggcatggcgacc
aacatcccgccgcacaacctaagggaggtggtggacggctgtctgcacctgctgcgcaac
ccggatgcgacggtcgacgaactgatcgagctgatcccggcgccggatttcccgaccgcc
ggcatcatctacggcatctcgggcgtgcgcgagggctatcgcaccggccgtggccgcgtg
gtgatgcgtgccaagacgcacttcgaggatatcgaccgcggtcagcgccaggcgatcatc
gtcgatgagctgccctatcaagttaacaagcgcacgctgctcgagcggatcgccgaactg
gtgaccgaaaagcgcatcgagggcatttccgatatccgcgacgagtccgacaagtcgggc
atgcgcgtggtgatcgagctcaagcgtggcgaagtgccggaggtcgtgctcaacaacctc
tataagaatacgcagttgcaggacacgttcggcatgaacatggtggcgctggtcgacggc
cagccccgcctgctgaacctgcgccagatgctggagtgcttcctgctgcaccgccgcgag
gtggtgacgcgtcgcacggtgttcgatctgcgcaaggcgcgcgagcgggggcacatcctc
gaggggctggccgtggcgctggccaatatcgacgagttcatcgccatcatcaaggctgcg
ccgacacctccgatcgccaagcaggaactgatgggtcgcaactgggattcgggcctggtg
cgcgagatgctgtcgcgggccgagagcgacaccgtcggcggccgtgccgcctatcgtccg
gaagggctgctgcccgttttcggcatgcaggagggggggctctacaagctgtccgacacg
caggcccaggaaatcctgcagatgcgcctgcaacgcctcacggggctggagcaggacaag
atcgtccaggaataccgcgaagtgatggcgcagattgccgacctgctggacatcctggcg
cgcccggagcgcattactgcgatcatcgtcgaggaactcacgctgattcgcgcggaattc
ggcgacgagcgtcgctcgcagatcgagcataatgcgaccgagttggacaccgaagacctc
attacgccgcaggatctggtggtgacgctgtcccacagcggctatatgaagagccagccg
atctccgaataccgcgcgcagaagcgtggcgggcgcggcaagcaagccgccgccaccaag
gaagatgactggatcgacacgctatttgtcgccaacacgcacgattacatcctctgcttc
tccaatcgcggccgtctctactggctcaaggtgtgggaggtgccgcaaggcagccgcaat
tcgcgcgggcgcccgatcgtcaacatgttcccgctgtcgcccggcgagaagatcaatgtg
atcttgccggtcaagcagttcgatgagcagcacttcgtcttcatggccacttccaagggc
acggtcaagaaaacggcgctcaccgaattctccaacccgcgcaaggccggcatcatcgcc
gtggacctcgatgacggcgatttcctgatcggcgcggatatcaccgatggccagcatgat
gtgatgctgttctcggacgccggcaaggcggtccgctttgacgagaacgatgtccgcccg
atgggccgtcaggcgcgcggggtgcggggcatgaacctggaggaaggccagcaggtgatc
gccatgctggtggcgccggccgaaacggcgggcgaaggcgagcaggcggtggcgggcagt
gtgctgaccgctaccgagaacggctacggcaagcgcacgccgatctccgagtacacccgc
catggccgcggcaccaagggcatgatcgcgatccagacctccgagcgcaacggcaaggtg
gtcgcggccgcgctggtggcgcccgaggacgagatcatgctgatcacgaccggcggtgtg
ctgatccgtacccgcgtggatgagatccgcgagatggggcgcgccacccagggcgtcacg
ctgattgctgtgggcgagggtaacaaattgtccgggctgcaacgtgtggtggagtcggat
gccgagggcgaagatgccgccgatggcgggccggaatccgatggcgaagcgccggacgcg
gataccgccgaaacataa
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