Ralstonia pseudosolanacearum GMI1000: RSc1011
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Entry
RSc1011 CDS
T00071
Symbol
uvrB
Name
(GenBank) probable uvrabc system protein b (uvrb protein) (excinuclease abc subunit b).
KO
K03702
excinuclease ABC subunit B
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSc1011 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc1011 (uvrB)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSc1011 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSc1011 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Kinesin
UB2H
AAA_16
P-loop_SecA
AAA_22
HEM4
UvrD-helicase
Microtub_bd
Nab1
Motif
Other DBs
NCBI-ProteinID:
CAD14713
UniProt:
Q8Y0N2
LinkDB
All DBs
Position
1061898..1063988
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AA seq
696 aa
AA seq
DB search
MTDLSQVPSPYDESKFVTFDGSPFQLYQPYPPAGDQPEAIRQLVEGIGDGLSYQTLLGVT
GSGKTYTMANVIAQAGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPTEYHQMILTL
RTGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEV
DSLQLFDPLTGRVRQKILRFTVYPSSHYVTPRETVLRAIGTIKAELRERLDFFYQENKLV
EAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAQPGEPPPTLVDYLPSDALMFLDESH
VLIGQLNGMYNGDRARKETLSAYGFRLPSALDNRPLKFAEFEGKMRQVVFVSATPADYEK
QRAGDEVVEQVVRPTGLVDPIIHVRPATTQVDDLLSEIHERVKAGERVLVTTLTKRMAEQ
LTEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGTAILYGDRITESMKKAIGETERRRAKQIAHNEA
HGITPRGVVKRIKDIIDGVYNVDDARAELKAAQDAAKYEDMSEKQVGKEIKRLEKQMLDH
AKNLEFEKAAAVRDQLAKLKSQVFGASGEDHIVPAA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctcagccaagtccccagcccgtacgacgagtcgaagttcgtcacattcgac
ggctcgccgttccagctgtatcagccgtatccgcccgccggcgaccagcccgaggcgatc
cgccaactggtcgagggtatcggtgacggcctgtcgtaccagacgctgctgggcgtgacg
ggctcgggcaagacctacacgatggccaacgtgatcgcacaggcggggcggcccgcgatc
gtgttcgcgcccaacaagacgttggcggcgcaactgtattcggagttccgcgagttcttc
ccgcgcaatgcggtcgagtacttcgtctcgtactacgactactaccagccggaagcgtac
gtgccgcagcgcgacctgttcatcgagaaagattcgtcggtcaacgagcatatcgagcag
atgcggctgtcggccaccaagagcctgctggagcgccgcgacgtggtgatcgtggccacc
gtgtcggccatctacggcatcggcaacccgaccgaataccaccagatgatcctgacgctg
cgcactggcgacaagatcagccagcgcgacgtgatcgcgcgcctgatcgccatgcagtac
acgcgcaacgagacggacttccagcgcggcaccttccgcgtgcgcggcgacaccgtcgac
atctttcccgccgagcacgccgagatggcggtgcggctggagctgttcgacgacgaggtc
gattcgctgcagctgttcgatccgctcaccgggcgcgtgcggcagaagatcctgcgcttc
acggtgtacccgtcgagccactacgtgacgccgcgcgagaccgtgctgcgcgccatcggg
accatcaaggccgagctgcgcgagcggctggatttcttctaccaggagaacaagctggtc
gaggcgcagcgcctggagcagcgcacgcgcttcgacctggagatgctgcaggagctgggc
ttctgcaagggcatcgagaactattcgcggcacctgtccggcgcccagccgggcgagccg
cctccgaccctggtcgactacctgccgtccgacgcgctgatgttcctggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcgcgcaaggagacgctg
tccgcgtatggcttccgcctgccgtccgcgctggacaaccggccgctgaagtttgccgag
ttcgagggcaagatgcggcaggtggttttcgtgtccgccacgccggccgattacgagaag
cagcgcgccggcgacgaggtggtcgagcaggtggtgcggcccacgggcctggtcgatccg
atcatccacgtgcggccggccaccacgcaggtggacgacctgctgtcggagatccacgag
cgcgtcaaggccggcgagcgcgtgctggtcaccacgctcaccaagcgcatggccgagcag
ctgaccgagttcctgtcggaaaacggcgtcaaggtccgctacctgcactcggacatcgac
accgtcgagcgcgtggagatcatccgcgacctgcggctgggcaccttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctggacattcccgaggtgtcgctggtggccatcctc
gacgccgacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgc
gccgcgcgcaacgtcaacggcaccgccatcctctatggggatcgcatcaccgagtcgatg
aagaaggccattggcgagaccgagcggcgacgcgccaagcagatcgcccacaacgaggcc
catggcatcacgccgcgcggcgtggtcaagcgcatcaaggacatcattgacggcgtgtac
aacgtcgacgatgcgcgcgcggagctgaaggccgcgcaggatgccgccaagtacgaagac
atgagcgagaagcaggtcggcaaggaaatcaagcgtctcgaaaagcagatgctcgaccac
gccaagaacctggaattcgagaaggcggccgcggtgcgcgaccagttggccaagctcaag
tcgcaggtcttcggggccagcggcgaagaccatatcgtgccggcggcctga
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integrated database retrieval system
