Ralstonia pseudosolanacearum GMI1000: RSc1058
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Entry
RSc1058 CDS
T00071
Name
(GenBank) probable periplasmic protease signal peptide protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso01503
Cationic antimicrobial peptide (CAMP) resistance
rso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSc1058
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RSc1058
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rso01002
]
RSc1058
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rso03110
]
RSc1058
Enzymes [BR:
rso01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
RSc1058
Peptidases and inhibitors [BR:
rso01002
]
Serine peptidases
Family S1: chymotrypsin family
RSc1058
Chaperones and folding catalysts [BR:
rso03110
]
Other chaperones and cochaperones
DegP / HtrA
RSc1058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
Trypsin
PDZ
PDZ_Tricorn
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
CAD14760
UniProt:
Q8Y0I6
LinkDB
All DBs
Position
1111370..1112887
Genome browser
AA seq
505 aa
AA seq
DB search
MRTARTVYALRLLCVAAVFAAGGALMPAYAQNATGSVATGTYGLPDFADLVEKVSPAVVN
IRTTEKVRMQNNPSDDDMAEFFRRFFGVPMPGTPGQGQGQKRRNAPPQAEEEQSRGVGSG
FIMSGDGYVLTNAHVVEGAETIYVTLTDKREFKAKLIGSDKRTDVALVKVEATGLPSLKL
GDSDKVRVGEWVLAIGSPFGLDNTVTAGIVSAKGRDTGDYLPFIQSDVAVNPGNSGGPLI
NLRGEVIGINNQIFSQSGGYMGISFAIPIDEAMRVAEQLKTQGRVTRGRIGVAIDNVPKD
AAESLGLGRARGAYVGNVESGGPADKAGIEAGDIVLKFNGRDVEKAGDLQRQVGESKPGT
RATVQVWRKGATRDLTVTVAELQPDTKVAQRGKGGQSDNGQPGAGKQNALGLVVADLSEG
AQREFKTKAGVEVQVADGPAARAGIRPGDVILRVGDTDVTSAKQFNDVVGRLDKSRMVAV
FVRRGDATQVVTMRPSTARAGGGQP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgctcgaaccgtttacgccttgcgtctgctttgcgttgccgccgtcttcgct
gccggtggcgcgctgatgccggcttacgcgcagaacgccaccggtagcgtggcgacgggc
acctatggcctgcctgactttgccgatctggtcgaaaaggtcagcccggcggtggtcaat
atccgcaccaccgagaaggtgcggatgcagaacaacccgagcgatgacgacatggccgag
tttttccgccgcttcttcggcgtaccgatgccgggtacgccggggcaggggcagggccag
aagcgccgcaacgccccgccgcaggccgaggaggagcagagtcgcggcgtcggctccggc
ttcatcatgtcgggcgacggctatgtgctgaccaacgctcacgtggtcgaaggcgcggag
acgatctacgtgacgctgaccgacaagcgtgaattcaaggccaagctgatcggctccgac
aagcgcaccgatgtggcgctggtcaaggtggaggccaccggcctgccgagcctgaagctg
ggcgattcggacaaggtgcgtgtgggcgagtgggtgctggcgattggttcgccgttcggg
ctggacaacaccgtcaccgcgggcatcgtgtcggccaaggggcgtgacaccggcgattat
ctgccgttcatccagtccgacgtggccgtgaatcccggcaactcgggcggcccgctgatc
aacctgcgtggcgaggtgatcggcatcaacaaccagatcttcagccagagcggcggctac
atgggcatctcgttcgcgattccgatcgatgaagcgatgcgcgtggccgagcagctcaag
acgcaaggccgggtgacgcgcggccgcatcggtgtggcgatcgacaatgtgccgaaggac
gcagcggagtcgctgggcctaggccgtgcgcgtggcgcctatgtgggcaatgtcgagtcg
ggtggccccgccgacaaggcaggcatcgaggccggcgacatcgtcctgaaattcaatggg
cgcgacgtcgagaaggccggtgacctgcagcgtcaggtcggcgagagcaagcctggtacg
cgcgccaccgtgcaggtgtggcgcaagggcgcgacgcgtgatctgacggtgacggtggcc
gaactgcagcccgataccaaggtggcgcagcggggcaaaggtggccaatccgacaatggc
cagccgggcgccggcaagcagaatgcgcttgggctggtggtggccgatctgtcggaaggc
gcgcagcgagagttcaagacgaaggcaggcgtcgaggtgcaggtggcggatggtcccgcc
gcgcgcgccggcatccgcccgggagacgtgatcctgcgcgtgggcgacaccgatgtcacc
agcgccaagcaattcaacgacgtggtcggccggctggacaagagtcgcatggtggcggtg
ttcgtccgccgtggcgatgccacgcaggtcgtgacgatgcgaccgagcacggcgcgggcc
ggcggcggccagccgtga
DBGET
integrated database retrieval system
