Ralstonia pseudosolanacearum GMI1000: RSc1065
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Entry
RSc1065 CDS
T00071
Symbol
recO
Name
(GenBank) probable dna repair protein reco (recombination protein o).
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RSc1065 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc1065 (recO)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RSc1065 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RSc1065 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
CAD14767
UniProt:
Q8Y0H9
LinkDB
All DBs
Position
1118280..1119098
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AA seq
272 aa
AA seq
DB search
MAGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIID
VFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGG
EGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHGEPVAFTLRAFERVLLRETGF
AAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATA
TQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgatccgatccgattccggacgaggcggcggaatggctggccgaggagggc
gttgccggcgccgcgccgcgcaagggctttcccgccgcgcgcgccgagcatcgcgtctcg
cagcagccggcgttcgtgctgcacagctatccctatcgcgagaccagcctcatcatcgac
gtcttcacgcgcgatcacggtcggatcgcgctggtggccaagggcgccaagcggccgcat
tcggccttgcgcgccgtgctgcagacgttccagccgctgtcgctgtcgtggagcgggcgc
ggtgaggtgaagaccctgacgcgcgccgagtgggtcggcggcatgctgccgctggggggc
gaggggctgctgtcaggcttctacctgaacgagctgctggtcaagttcgttgcgcgggag
gacgggcacccggtgctgttttcgcactatgtggaaacgctcaacaagctcgcccacggc
gagcctgttgccttcacgctgcgcgccttcgagcgcgtgctgctgcgcgagaccggtttt
gccgcccagcttgaccgctgcgtcgacggcgagcccgtgcagcccgacggcgactacgtc
tatcaccccgaacgaggcatccggcgcgcgctgccgagcgatccgtcctcgtggccggtg
ctgcgcggacagacgctgctcgacatggagcgcgacgattattcccgtccggccacggcc
acgcagagccgcagcctgatgcggttcctgctgcattatcatttgcacggcacgccgctt
tcgacgcgccagatcctgatcgacttgcagaaactatga
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