Ralstonia pseudosolanacearum GMI1000: RSc1127
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Entry
RSc1127 CDS
T00071
Symbol
kdsA
Name
(GenBank) probable 2-dehydro-3-deoxyphosphooctonate aldolase (phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase) (kdo-8-phosphate synthetase) (kdo 8-p synthase) (kdops) protein
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00540
Lipopolysaccharide biosynthesis
rso01100
Metabolic pathways
rso01250
Biosynthesis of nucleotide sugars
Module
rso_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RSc1127 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc1127 (kdsA)
Enzymes [BR:
rso01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RSc1127 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
Lipid A
RSc1127 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
CAD14829
UniProt:
Q8Y0B7
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All DBs
Position
1186245..1187099
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AA seq
284 aa
AA seq
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MKLCDFEIGLDRPFFLIAGTCVIESEQMAIDTAGTLKEITGALGIPFIYKSSFDKANRSS
DASFRGLGMEEGLRILAEVRRQVGVPVLTDIHEIDEIKPVASVVDVLQTPAFLCRQTDFI
RACAQSGKPVNIKKGQFLAPHDMKNVIDKARHAARDAGLPEDSFMACERGASFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGVFMETH
PDPACAKSDGPNAVPLRRMKDLLSVLKELDTLTKRNGFLENQFD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgcgatttcgagatcggcctcgaccgtccgttcttcctgattgccggcacc
tgcgtgatcgagtccgagcagatggcgatcgacaccgccggtacgctcaaggagatcacc
ggcgcgctgggcattccgttcatctacaagtcgtcgttcgacaaggcgaaccgctcgtcg
gatgcgtcgttccgcggcctcggtatggaagagggcttgcgcatcctggcggaagtccgc
cgccaggtgggggtgccggtgctgaccgacatccacgagatcgacgagatcaagccggtg
gccagcgttgtggacgtgctgcagacgccggccttcctgtgccgccagaccgatttcatc
cgcgcctgcgcgcagagcggcaagcccgtcaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtcatcgacaaggcgcgccacgccgcccgcgatgccggcctgccc
gaagacagcttcatggcctgtgaacgcggcgcttcgttcggctacaacaacctggtgtcg
gacatgcgctcgctggcgatcatgcgcgagaccggcgcgccggtggtgttcgatgccaca
cactcggtgcagctgccgggcggccagggcaccagctcgggcggccagcgcgagttcgtg
ccggtgctggcccgcgccgccgtggccaccggcgtggccggcgtcttcatggaaacgcac
cccgatcccgcctgcgcgaaatcggacggtccgaatgccgtgccgctgcgccgcatgaaa
gacttgctgtcggtgctcaaggaactggacacgctgaccaagcgcaacggcttcctcgaa
aaccagttcgactga
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