Ralstonia pseudosolanacearum GMI1000: RSc1286
Help
Entry
RSc1286 CDS
T00071
Name
(GenBank) putative rrna uridine-516 pseudouridylate synthase-related pseudouridylate synthase protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rso03009
]
RSc1286
Enzymes [BR:
rso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RSc1286
Ribosome biogenesis [BR:
rso03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSc1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD14988
UniProt:
Q8XZV9
LinkDB
All DBs
Position
1367863..1369659
Genome browser
AA seq
598 aa
AA seq
DB search
MSADANAAAPRQDGAGEGEESSAPRRKGLRRGLRNLVAARRQQHEGRAESEPAGEGAASA
GEGAQAPRKARAPRSRKPKEANAAAGEVVAIPEAMSLSAEGRPSAAEASAERRGARGRFG
KGRRQAEGQPAGDRAEGQGGNAGGGNGGRGKNARPTRGAKGQGKAAGQSRGKGGKGAEDV
FQYVISGAYDADADVGGAPQSTKVRELTAEDDAPKLHKILADAGLGSRRDMEDLILQGRV
SVNGLPAHIGQRILPTDQVRVNGKLIQRKLPSKPPRVLLYHKPAGEIVSQSDPEGRPTVF
DSLPRMKTGKWVAVGRLDFNTEGLLIFTTSGDIANRFMHPRYGVEREYAVRTLGELPESD
RQKLLQGIRLDDGEANFLRCADGGGEGVNHWYHVALTEGRNREVRRMFEAVNLTVSRLIR
TRYGSFVLPRGLKRGRWQEVSAEDVRGLMGLLGLKVPSASASGGQGSQGGRQGNRRREAQ
PVLMGPMSSGFTGEATFQSRGQGIENGNRAMPAPRRQSNPRQPDPMQTSMGYINVGGPTT
LTARTRMGGGRGLPGAGSSNSGGSGNGNRAPGNKRPAKGGGGLPNGNKARGGGKRGKR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgatgccaatgcagcggcgcctcgccaggatggcgccggagagggcgaggaa
tcgtccgcgccgcgccgcaagggtctgcgccgcggcctgcgcaacctagtcgccgcgcgg
cggcagcagcatgagggccgcgccgaaagcgagcccgcgggcgagggtgcggcgagcgcc
ggcgaaggcgcgcaagcgccgcgcaaggctcgcgcaccgcgcagccgcaagccgaaagag
gcgaatgccgcagcgggcgaggttgtggccattccggaggcgatgagtttgtcggcggaa
gggcggccgtccgcggcggaggcctcggccgagcgtcggggagcgcgtggccgcttcggc
aagggccgccgccaggctgagggccagccggccggcgatcgcgcggaaggtcagggcggc
aatgccggcggcggcaacggcggccggggtaagaacgcccgcccgacccgtggcgccaag
gggcaaggcaaggcggccggccagagccggggcaagggcggcaagggtgccgaggacgtc
ttccagtacgtgatttccggcgcctatgatgctgacgcggatgtgggcggcgcgccgcag
tcgaccaaggtgcgcgaactcactgccgaggacgacgccccgaagctgcacaagattctc
gccgatgcgggcctgggctcgcgtcgcgacatggaagacctgatcctgcagggccgcgtc
tccgtgaacggcttgccggcgcatattggccagcgcatcctgccgaccgatcaggtgcgc
gtcaacggcaagctcatccagcgcaagctgccgagcaagccgccgcgcgtgctgctgtat
cacaagccggccggcgagatcgtcagccagtctgatcccgagggccgtccgaccgtgttc
gattccctgccgcgcatgaagaccggcaagtgggtcgccgtgggccgcctggacttcaac
accgaaggcttgctgatcttcaccacgtcgggcgatatcgccaatcggttcatgcatccg
cgctacggcgtcgaacgtgaatatgcggtgcgcacgctgggcgagctgccggagtccgac
cgccagaaactgttgcagggcatccgcctggatgacggcgaagcgaatttcctgcgctgc
gcggatggcggtggtgagggcgtcaatcactggtaccacgtcgcgctcaccgaaggtcgc
aaccgcgaggtccgccgcatgttcgaggccgtcaacctgacggtgtcgcgcctgatccgc
acgcgctatggcagtttcgtgctgccgcgcggcctcaagcgcggccgctggcaggaggtg
tcggccgaggatgtccgggggctgatggggttgctgggcttgaaagtgccttcggcaagt
gccagcggcggccagggtagtcagggtggccgacagggtaaccgtcgccgcgaggcgcag
ccggtgctgatggggccgatgtcgtccggcttcacgggcgaggcgacgttccagtcgcgc
ggccagggtatcgaaaacggcaaccgtgcgatgccggctccgcgtcgccagtccaacccg
cgtcagccggacccgatgcagacctcgatgggctacatcaacgttggcggaccgaccacg
ctgaccgcgcggacccgcatgggcggtggccgtggcctgccgggtgccggcagcagcaat
agcggtggtagcggcaatggcaaccgtgcgccgggcaacaagcgtccggccaagggcggt
ggcggcttgccgaacggcaacaaggcgcgtggcggcggcaagcgcggcaagcgctga
DBGET
integrated database retrieval system
