Ralstonia pseudosolanacearum GMI1000: RSc1299
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Entry
RSc1299 CDS
T00071
Name
(GenBank) putative trna-dihydrouridine synthase protein
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rso03016
]
RSc1299
Transfer RNA biogenesis [BR:
rso03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
RSc1299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
TPR_16
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
CAD15001
UniProt:
Q8XZU6
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All DBs
Position
1385284..1386318
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AA seq
344 aa
AA seq
DB search
MSAERSTPNPRRLSVAPMMDWTDRHCRYFHRQISRHTWLYTEMVTTGALLHGDVPRHLDF
DEAEHPVALQLGGSEPDDLAQSARLGERWGYREINLNCGCPSERVQRGAFGACLMAEPKL
VADGVKAMRDAVSIPVTVKHRIGIDAIETYDFVRDFVGAIAEAGCETFIVHARNAILKGL
SPKENREIPPLRYEVVYQLKRDFPRLEILLNGGVQTLEQIDTHLAHVDGVMIGREAYHHP
HLMAGFDARYYGADAVAPTRAEVEDAMIDYIGRWVARGGYAGAAVRHMLGLYRGVAGARG
WRRVLSDAKALGRVKTPDDARALFETARAHLRRGAEADEEAVAP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgctgaacgctctacgccgaatccgcgtcgcctgtccgttgccccgatgatggac
tggaccgatcgccactgtcgctacttccatcgccagatctcccgccacacctggctctac
acggaaatggtgaccaccggcgcgctcctgcacggcgacgtgccgcgccatctcgacttc
gacgaggcggagcacccggttgcgctgcagctcggcggcagcgaacccgacgacctggcg
cagtccgcccgcttgggggagcgctggggctatcgcgagatcaacctgaactgcggctgt
ccgtccgagcgcgtgcagcgcggtgcgttcggcgcgtgcctgatggccgagccgaagctg
gtggccgatggcgtcaaggcgatgcgcgatgcggtgtcgatcccggtcacggtcaagcac
cgtatcggcatcgacgcgattgagacctacgacttcgtgcgcgatttcgtcggcgccatc
gccgaggcgggttgcgagaccttcatcgtgcacgcccgcaacgccatcctgaaggggttg
agcccgaaggagaaccgcgagatcccgcctctgcgctacgaggtggtctaccagctcaag
cgtgatttcccgcggctggagatcctgctgaacggcggcgtgcagacgctggagcagatc
gacacgcatcttgcccacgtcgacggcgtgatgatcggccgcgaggcctatcaccacccg
cacctgatggcgggcttcgatgcgcgctactacggtgccgacgcggtcgcgcccacgcgc
gccgaggtcgaagacgcaatgatcgattacatcggccgctgggtggcgcggggcggatat
gccggcgcagcggtgcgccacatgctggggctgtatcgcggcgtggccggcgcccggggc
tggcggcgcgtgctgtcggacgccaaggcgcttggccgcgtcaagacgccggacgacgcg
cgagccctgttcgagacggcgcgcgcgcacctgcgccgcggcgcggaggcggatgaagag
gcggtcgccccataa
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