Ralstonia pseudosolanacearum GMI1000: RSc1372
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Entry
RSc1372 CDS
T00071
Symbol
radA
Name
(GenBank) probable atp-dependent protease, dna repair (atp-binding dna-binding) protein (sms protein)
KO
K04485
DNA repair protein RadA/Sms
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc1372 (radA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RSc1372 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
AAA_16
ChlI
GvpD_P-loop
RecA_N
Lon_C
AAA_24
AAA_14
nSTAND_NTPase5
AAA
nSTAND3
SLFN-g3_helicase
NTPase_1
AAA_28
AAA_30
AAA_5
CobU
MCM
NACHT
ATPase_2
AAA_29
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CAD15074
UniProt:
Q8XZM3
LinkDB
All DBs
Position
1461787..1463157
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AA seq
456 aa
AA seq
DB search
MAKSKTVYTCTECGGTSPKWAGQCPHCQQWNTLVETVAQPASGAGARFQSLAASAVVRKL
ADIDAVDVPRFSSGIDEFDRVLGGGLVGGGVVLIGGDPGIGKSTLLLQALSNLAASRRVL
YVSGEESGAQIALRARRLGVESPNLALLAEIQLERIQATIEAEKPEVVVIDSIQTLYSEA
LTSAPGSVAQVRECAAQLTRIAKRLDVTTILVGHVTKEGALAGPRVLEHIVDTVLYFEGD
THSAYRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQTVPGSCVLVTQEG
TRPLLVEIQALVDAAGVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGV
KITEPAADLAVLLAIHSSMRNKPLPRGLVVFGEIGLAGEIRPTPRGQERLKEAAKLGFSI
AVIPKSNAPKQPIDGLQVIAVERIEQAIDRVRGLEA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggccaagagcaagacggtctatacgtgcaccgagtgcggcggcacgtcgccgaaatgg
gcggggcagtgcccgcattgccagcagtggaacacgctggtggaaaccgtggcgcagccg
gcgtccggcgccggcgcgcgcttccagtcgctggcggcgagcgccgtggtgcgcaagctg
gcggacatcgacgccgtggacgtgccgcgcttctccagcggcatcgacgaattcgaccgc
gtgctgggcggcggcctggtcggcggcggcgtggtgctgatcggcggcgatccgggcatc
ggcaagtcgacgctgctgctgcaggcgctgtccaacctggcggccagccggcgcgtgctg
tatgtgagcggcgaggagtccggcgcgcagatcgcgctgcgggcgcggcgcctgggcgtc
gaaagcccgaacctggcgctgctggccgagatccagctcgagcgcatccaggccaccatc
gaggcggagaagcccgaggtggtcgtcatcgactccatccagacgctgtactcggaggcg
ctgacctcggcgccgggctcggtggcccaggtgcgcgaatgcgcggcgcagctcacgcgc
atcgccaagcggctggacgtgaccaccatcctggtcggccacgtgaccaaggagggcgca
ctggcgggcccgcgcgtgctggagcacatcgtcgatacggtgctgtatttcgagggcgac
acgcattcggcctaccggctggtgcgcgcgttcaagaaccgcttcggcgcggtcaacgag
ctgggcgtgttcgccatgaccgagcgcggcctgcgtggcgtggcgaatccgtcggcgctg
ttcctgtcgcagcacgagcagaccgtgccgggttcgtgcgtgctggtgacgcaggagggc
acgcgtccgctgctggtggagatccaggcgctggtggatgcggcgggcgtgccgaacccg
cggcggctggcggtgggcctggagcagaaccggctggcgatgctgctggcggtgctgcac
cggcacgcgggcattgcctgctttgaccaggacgtgttcctcaatgccgtgggcggggtc
aagatcaccgagccggcggcggacctggcggtgctgctggcgatccattcgtcgatgcgc
aacaagccgctgccgcgcgggctggtggttttcggcgagatcgggctggccggcgagatc
cgtccgacgccgcgcgggcaggagcgcctgaaggaagcggccaagctgggcttctcgatt
gccgtgatccccaagtcgaacgcgcccaagcagccgatcgacggcctgcaggtgatcgcc
gtcgagcgcatcgagcaggcgatcgaccgggtgcgcgggctggaggcttaa
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