Ralstonia pseudosolanacearum GMI1000: RSc1401
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Entry
RSc1401 CDS
T00071
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rso03009
]
RSc1401
Enzymes [BR:
rso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
RSc1401
Ribosome biogenesis [BR:
rso03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSc1401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD15103
UniProt:
Q8XZJ4
LinkDB
All DBs
Position
complement(1497887..1499782)
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AA seq
631 aa
AA seq
DB search
MTDSDDFPGDDTKRSASDPTQRATRPGKRATLGVRRDDTGNPVRTTGKPLRASDLNRDRQ
PLRPSQRRPKPQEGDAKRPARARRDDDSQPPREAKPRRMQGDRPPRRFEDRPPRRFDDER
PPRKFGDDQRPPRRFGDERPPRRFEDRPPRRFDDERPPRKFGDDQRPPRRFGDEQPPRRF
EDRPPRRFDDERPPRKFGDDQRPPRRFDDERPPRRFEDRPPRRFDDERPPRKFGDDQRPP
RRFGDERPPRRFEDRPPRRFDDERPPRRSGDDQRPPRRFGDERPPRRFEDRPPRRFDDER
PPRRSGDDQRPPRRFEDRPPRRFDDERPPRRSGDDQRPPRRFEDRPARAPRPERDERAPQ
REAAHTPGSAPLAESSGLVRLSKRMSELGLCSRREADEWIPRGWVLVDGEPVTELGSRVR
PDAEIEILPAARSEQGERVTVLLHKPVGYVSGQAEDGYEPAAALFTAENQWEEDPTRKHF
AAWQHKGLAPAGRLDIDSTGLLVLTQDGRVARHLIGEDSTVEKEYLVRVVWNAPQGPVEH
DISKVFPEDLLEMLRHGLSLDGEALKPAKVSWQNEEQLRFVLREGKKRQIRRMCEQVGLE
VVGLKRIRMGSVVLGDLPVGKWRFLGRFEKF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccgacgatttccccggcgacgacaccaagcgctccgccagcgaccccacg
cagcgggccacccgcccgggcaagcgcgccacgctcggcgtgcgccgcgacgacacgggc
aacccggtgcgcaccaccggcaagccgctgcgcgcctccgacctgaaccgcgaccgccag
ccgctgcgcccgtcgcaacgccggcccaagccgcaggaaggcgacgccaagcggcccgcc
cgagcgcgccgcgacgacgacagccagccgccgcgcgaggccaagccgcgccgcatgcag
ggggaccgcccgccgcgccggttcgaggaccgtccgccgcgtcgattcgatgacgaacgt
ccgccgcgcaagttcggcgacgatcaacgtccgccccgtcgcttcggcgatgagcggccg
cctcgccggttcgaggaccgtcctccgcgccgattcgatgacgaacgtccgccgcgcaag
ttcggcgacgatcaacgtccgccccgtcgcttcggcgatgagcagccgcctcgccggttc
gaggaccgtcctccgcgccgattcgatgacgagcggccgccgcgcaagttcggcgacgat
caacgtccgccgcgtcggtttgacgatgagcggccgcctcgccggttcgaggaccgtccg
ccgcgccgattcgatgacgagcggccgccgcgcaagttcggcgacgatcaacgtccgccc
cgtcgcttcggcgatgagcgaccaccccgccggttcgaggaccgtccgccgcgccgattc
gatgacgaacggccgccgcgcaggtccggcgacgatcaacgtccgccccgtcgcttcggc
gacgagcggcctccacgccgtttcgaggaccgcccaccgcgccggttcgatgacgaacgg
ccaccgcgcaggtccggcgacgatcaacgcccgccccgtcgcttcgaggaccgtcctccg
cgccggttcgatgacgaacggccgccgcgcaggtccggtgatgatcagcgccctccgcgc
cgcttcgaggaccgtccggcccgcgcgccgcgccccgaacgcgatgagcgcgcgccccaa
cgcgaggcggcacacacgcccggttcggcacccctggcggaatcgtcgggcctggtgcgg
ctgtccaagcgcatgtccgagctgggcctgtgctcgcgccgcgaggcggacgagtggatt
ccgcgcggctgggtgctggtggacggcgagcccgtcaccgaactgggttcgcgcgtgcga
ccggatgccgagatcgagatcctcccggccgcgcgctccgaacagggcgagcgcgtgacg
gtgctgctgcacaagcccgtgggctatgtgtcgggccaggcggaagacggctacgagccc
gccgccgcgctgttcacggcggagaaccagtgggaggaggatccgacccgcaagcatttc
gccgcctggcagcacaagggcctggcgccggccggccggctggacatcgactccaccggc
ctgctggtgctgacgcaggacggccgcgtggcgcgccacctgatcggcgaagactcgacc
gtcgagaaggaatacctggtgcgcgtggtgtggaatgcgccgcagggccccgtcgagcac
gacatctccaaggtcttccccgaagacctgctggagatgctgcgccacggcctgtcgctg
gacggcgaggcgctcaagcccgccaaggtcagctggcagaacgaagagcagctgcgcttc
gtgctgcgcgaaggcaagaagcgccagatccgccggatgtgcgagcaggtcggcctggag
gtggtgggcctcaagcgcatccgtatgggcagcgtcgtgctgggcgacctgccggtgggc
aagtggcgcttcctgggccgcttcgagaagttctga
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