Ralstonia pseudosolanacearum GMI1000: RSc1443
Help
Entry
RSc1443 CDS
T00071
Name
(GenBank) probable 2h phosphoesterase (2'-5' rna ligase) protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rso03016
]
RSc1443
Enzymes [BR:
rso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RSc1443
Transfer RNA biogenesis [BR:
rso03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RSc1443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CAD15145
UniProt:
Q8XZF8
LinkDB
All DBs
Position
1545732..1546328
Genome browser
AA seq
198 aa
AA seq
DB search
MTQLTLPGFEAIPQVPAHRLFLAVKPDADAARRIAQRVALLRPDVGFKARPLRVERLHVT
LHHLGDFVELPDTLVARACEAAAGVALPPFEVIFDQVVSFHGRRDHRPFVLTGGVGLHAL
IDFQHALGAALERAGLRVPQARFVPHVTLLYDRGGFAPKPIEPIAWTVREFVLIDSWLGR
TRYDEKGRWPLREGGLSS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaacttacgctgcccggattcgaagcgataccgcaggtgcccgcgcaccgcctg
ttcctggcggtcaagcccgatgcggatgcggccagacgcatcgcgcagcgggtcgcgctg
ctgcggccggacgtcggcttcaaggccaggccgctgcgcgtggagcggctgcacgtcacg
ctgcatcacctgggggatttcgtcgaactgccggacaccctggtggcgcgtgcctgcgag
gccgcggccggcgttgcgctgccgccgttcgaggtgatattcgaccaggtggtgagcttc
cacggccggcgcgaccaccggcccttcgtcctgacgggcggtgtcggcctgcatgccttg
atcgacttccagcacgcgctgggcgctgcgctcgagcgcgccgggctgcgtgttccgcag
gcgcgcttcgtgccgcacgtgaccctgctgtacgaccgcggcggctttgcgccgaagccg
atcgagccgatcgcctggacggtgcgcgagttcgtgctgatcgacagctggctcggcagg
acgcgctatgacgagaagggacgatggccgctgcgggagggcggcctatcgtcctga
DBGET
integrated database retrieval system
